Factsheet for TraesCS3B01G567400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G511000.1	Wheat	cytosol	88.89	89.19
HORVU3Hr1G110970.1	Barley	cytosol, nucleus, plastid	79.8	80.89
TraesCS3B01G567100.1	Wheat	nucleus	77.44	77.44
TraesCS3B01G567200.1	Wheat	mitochondrion	52.19	69.2
TraesCS3B01G567300.1	Wheat	mitochondrion	49.16	66.97
TraesCS3B01G568000.1	Wheat	cytosol	65.99	65.77
TraesCS3B01G572400.1	Wheat	cytosol, mitochondrion	33.0	64.47
TraesCS7B01G366700.1	Wheat	cytosol	33.0	64.05
TraesCS7B01G366400.1	Wheat	cytosol	16.5	63.64
TraesCS7B01G366600.1	Wheat	cytosol	33.33	63.46
TraesCS3B01G569000.1	Wheat	mitochondrion	47.81	63.39
TraesCS3B01G568900.1	Wheat	mitochondrion	28.96	61.43
TraesCS3B01G567800.1	Wheat	mitochondrion	44.78	59.38
TraesCS3B01G569700.1	Wheat	cytosol	62.63	57.94
KXG28223	Sorghum	mitochondrion	40.74	56.28
TraesCS7B01G413800.1	Wheat	cytosol	27.95	54.25
TraesCS5B01G222800.1	Wheat	cytosol	27.95	54.25
TraesCS6B01G176000.1	Wheat	cytosol	27.61	53.59
TraesCS6B01G115100.1	Wheat	cytosol	30.98	52.57
TraesCS7B01G366800.1	Wheat	cytosol	32.66	50.79
TraesCS6B01G293300.1	Wheat	plastid	47.47	46.23
TraesCS3B01G043200.1	Wheat	cytosol	21.89	45.77
TraesCS4B01G008400.1	Wheat	cytosol	19.87	45.74
TraesCS4B01G218000.1	Wheat	cytosol	19.53	43.94
TraesCS4B01G218100.1	Wheat	cytosol	19.53	43.94
TraesCS6B01G164600.1	Wheat	cytosol	33.67	43.67
TraesCS6B01G164700.2	Wheat	cytosol	33.33	43.23
TraesCS7B01G044300.1	Wheat	cytosol	9.09	42.86
TraesCS6B01G148000.2	Wheat	cytosol	33.67	42.02
TraesCS7B01G390900.1	Wheat	cytosol	19.19	41.01
TraesCS7B01G390800.1	Wheat	cytosol	19.19	41.01
TraesCS5B01G524500.1	Wheat	cytosol	13.8	41.0
TraesCS6B01G176400.1	Wheat	cytosol	18.52	40.74
TraesCS5B01G260700.1	Wheat	cytosol	18.52	40.74
TraesCS1B01G241200.1	Wheat	cytosol	18.86	40.29
TraesCS2B01G480400.1	Wheat	cytosol	19.19	40.14
TraesCS2B01G480300.1	Wheat	cytosol	19.19	40.14
TraesCS1B01G425700.1	Wheat	cytosol	20.88	40.0
TraesCS1B01G130900.1	Wheat	cytosol	20.88	40.0
TraesCS2B01G480600.1	Wheat	cytosol	18.18	39.13
TraesCS2B01G480500.1	Wheat	cytosol	18.18	39.13
TraesCS4B01G233100.1	Wheat	cytosol	19.87	38.31
TraesCS1B01G182700.1	Wheat	cytosol	20.88	38.27
TraesCS6B01G110300.1	Wheat	cytosol	33.67	37.04
TraesCS5B01G187200.1	Wheat	cytosol	17.51	36.62
TraesCS7B01G354200.1	Wheat	cytosol	33.67	35.71
TraesCS3B01G061600.1	Wheat	cytosol	28.28	33.87
TraesCS5B01G524600.1	Wheat	cytosol	15.15	32.85
TraesCS7B01G354100.1	Wheat	cytosol	33.67	32.79
TraesCS6B01G140600.1	Wheat	cytosol	16.84	32.68
TraesCS6B01G164900.1	Wheat	cytosol	16.84	32.68
TraesCS7B01G367700.1	Wheat	cytosol	16.84	32.68
TraesCS5B01G080200.1	Wheat	cytosol	16.84	32.68
TraesCS7B01G381800.1	Wheat	cytosol	16.84	32.68
TraesCS2B01G426500.1	Wheat	cytosol	16.84	32.68
TraesCS5B01G524700.1	Wheat	cytosol	14.14	30.22
TraesCS6B01G012500.1	Wheat	cytosol	24.58	29.8
CDX79728	Canola	cytosol	22.56	29.52
TraesCS7B01G354000.2	Wheat	cytosol	30.64	29.45
TraesCS2B01G107800.1	Wheat	cytosol	15.15	29.41
TraesCS2B01G107600.1	Wheat	cytosol	13.8	29.29
TraesCS7B01G004300.1	Wheat	cytosol	19.87	27.06
TraesCS7B01G367600.1	Wheat	cytosol	27.27	26.91
TraesCS4B01G387300.1	Wheat	cytosol	26.94	24.84
TraesCS7B01G486200.1	Wheat	cytosol	22.22	22.68
TraesCS4B01G389100.1	Wheat	endoplasmic reticulum	14.48	20.38
TraesCS1B01G325300.1	Wheat	cytosol	24.58	18.39
TraesCS5B01G386500.1	Wheat	nucleus	22.22	17.1
TraesCS5B01G387000.1	Wheat	cytosol	28.96	12.57
TraesCS5B01G386900.1	Wheat	cytosol	8.75	6.58

Protein Annotations

EnsemblPlants:TraesCS3B01G567400.1	EnsemblPlantsGene:TraesCS3B01G567400	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	PANTHER:PTHR45095
PANTHER:PTHR45095:SF2	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ScanProsite:PS00299	SMART:SM00213
SUPFAM:SSF54236	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:798990356..798993441

Molecular Weight (calculated)

32875.5 Da

IEP (calculated)

5.475

GRAVY (calculated)

-0.390

Length

297 amino acids

Sequence
(BLAST)

001: MPPKKCLDLS SAGPKLEDEM EEAAPGVSTS GTEGSMHDSE KEVGDRSSSG EDNKDDGRSQ SSQIDGADMD DPTKVHIFVK NPAGRKICLR GVHLSDTLYT
101: IKAKIQERYR LIFGGVQLED SRTLAEYGIK HDFTLDLQEK MQIFVTETLG GRTITLEVDS LDTIDKVKAK IEDIEGFPKV QQCLIFANKQ LEDGKLTLAD
201: HNICRGSTLL LILLPCSPTV AMKIYVKMLA GNTITLEVGR SETVNSVKVK LYELDGMPPR QQRLIFAGKQ LEDHRTLADY NIRKESTIQL VGRLCGC

Best Arabidopsis Sequence Match ( AT4G02890.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.