Factsheet for TraesCS2B01G480600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G458800.1	Wheat	cytosol	97.1	97.1
TraesCS2D01G459200.1	Wheat	cytosol	96.38	96.38
TraesCS2B01G480500.1	Wheat	cytosol	82.61	82.61
TraesCS7B01G366400.1	Wheat	cytosol	44.93	80.52
TraesCS4B01G008400.1	Wheat	cytosol	68.84	73.64
TraesCS4B01G218100.1	Wheat	cytosol	70.29	73.48
TraesCS1B01G241200.1	Wheat	cytosol	73.19	72.66
TraesCS5B01G260700.1	Wheat	cytosol	71.01	72.59
TraesCS6B01G176400.1	Wheat	cytosol	69.57	71.11
TraesCS7B01G390900.1	Wheat	cytosol	70.29	69.78
TraesCS7B01G390800.1	Wheat	cytosol	70.29	69.78
TraesCS4B01G218000.1	Wheat	cytosol	66.67	69.7
TraesCS2B01G480300.1	Wheat	cytosol	71.01	69.01
TraesCS2B01G480400.1	Wheat	cytosol	71.01	69.01
TraesCS5B01G187200.1	Wheat	cytosol	71.01	69.01
TraesCS4B01G233100.1	Wheat	cytosol	68.84	61.69
TraesCS5B01G524500.1	Wheat	cytosol	41.3	57.0
TraesCS5B01G524600.1	Wheat	cytosol	52.9	53.28
TraesCS2B01G107600.1	Wheat	cytosol	53.62	52.86
TraesCS5B01G524700.1	Wheat	cytosol	52.17	51.8
TraesCS2B01G107800.1	Wheat	cytosol	57.25	51.63
TraesCS1B01G130900.1	Wheat	cytosol	53.62	47.74
TraesCS1B01G425700.1	Wheat	cytosol	53.62	47.74
TraesCS7B01G366700.1	Wheat	cytosol	52.9	47.71
TraesCS7B01G366600.1	Wheat	cytosol	52.9	46.79
TraesCS6B01G176000.1	Wheat	cytosol	51.45	46.41
TraesCS5B01G222800.1	Wheat	cytosol	50.72	45.75
TraesCS7B01G413800.1	Wheat	cytosol	50.72	45.75
TraesCS1B01G182700.1	Wheat	cytosol	53.62	45.68
TraesCS6B01G115100.1	Wheat	cytosol	50.0	39.43
TraesCS7B01G366800.1	Wheat	cytosol	53.62	38.74
TraesCS6B01G164700.2	Wheat	cytosol	57.97	34.93
TraesCS6B01G164600.1	Wheat	cytosol	57.97	34.93
TraesCS6B01G148000.2	Wheat	cytosol	57.97	33.61
TraesCS7B01G354200.1	Wheat	cytosol	57.97	28.57
TraesCS6B01G110300.1	Wheat	cytosol	55.8	28.52
TraesCS3B01G572400.1	Wheat	cytosol, mitochondrion	29.71	26.97
TraesCS3B01G043200.1	Wheat	cytosol	27.54	26.76
TraesCS7B01G354100.1	Wheat	cytosol	57.97	26.23
TraesCS7B01G354000.2	Wheat	cytosol	57.97	25.89
TraesCS6B01G293300.1	Wheat	plastid	52.9	23.93
TraesCS6B01G012500.1	Wheat	cytosol	41.3	23.27
TraesCS7B01G367600.1	Wheat	cytosol	49.28	22.59
TraesCS3B01G567200.1	Wheat	mitochondrion	35.51	21.88
TraesCS3B01G568900.1	Wheat	mitochondrion	21.01	20.71
TraesCS3B01G567300.1	Wheat	mitochondrion	32.61	20.64
TraesCS3B01G569000.1	Wheat	mitochondrion	32.61	20.09
TraesCS3B01G567800.1	Wheat	mitochondrion	32.61	20.09
TraesCS4B01G389100.1	Wheat	endoplasmic reticulum	28.26	18.48
TraesCS4B01G387300.1	Wheat	cytosol	42.75	18.32
TraesCS3B01G567400.1	Wheat	cytosol	39.13	18.18
TraesCS3B01G567100.1	Wheat	nucleus	36.96	17.17
TraesCS3B01G569700.1	Wheat	cytosol	39.13	16.82
TraesCS3B01G568000.1	Wheat	cytosol	35.51	16.44
TraesCS3B01G061600.1	Wheat	cytosol	28.99	16.13
TraesCS7B01G004300.1	Wheat	cytosol	23.91	15.14
TraesCS7B01G486200.1	Wheat	cytosol	31.88	15.12
TraesCS1B01G325300.1	Wheat	cytosol	36.23	12.59
TraesCS6B01G164900.1	Wheat	cytosol	12.32	11.11
TraesCS6B01G140600.1	Wheat	cytosol	12.32	11.11
TraesCS7B01G367700.1	Wheat	cytosol	12.32	11.11
TraesCS7B01G381800.1	Wheat	cytosol	12.32	11.11
TraesCS2B01G426500.1	Wheat	cytosol	12.32	11.11
TraesCS5B01G080200.1	Wheat	cytosol	12.32	11.11
TraesCS5B01G386500.1	Wheat	nucleus	30.43	10.88
TraesCS7B01G044300.1	Wheat	cytosol	4.35	9.52
TraesCS5B01G387000.1	Wheat	cytosol	31.16	6.29
TraesCS5B01G386900.1	Wheat	cytosol	0.72	0.25

Protein Annotations

MapMan:17.1.2.1.43	Gene3D:2.20.28.70	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR000626	InterPro:IPR038587	InterPro:L40e_sf	PFAM:PF00240	PFAM:PF01020
PRINTS:PR00348	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF255	InterPro:Ribosomal_L40e	InterPro:Ribosomal_zn-bd
SMART:SM00213	SMART:SM01377	SUPFAM:SSF54236	SUPFAM:SSF57829	EnsemblPlantsGene:TraesCS2B01G480600	EnsemblPlants:TraesCS2B01G480600.1
InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	:	:	:

Description

No Description!

Coordinates

chr2B:-:678197709..678200047

Molecular Weight (calculated)

15529.1 Da

IEP (calculated)

10.208

GRAVY (calculated)

-0.552

Length

138 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITVEVESG GAVDSLKAKI HDKEGILPDQ QRLIFAGKQL GDGRTLADYN VQKESTLHLV LGLAGGDKGS CYPPKMEPNL LELALKYRQH
101: RLVCRKCYAR LPLRSANCRK KKCGHSNEIR PKEKLRYH

Best Arabidopsis Sequence Match ( AT2G36170.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGIIEP SLMMLARKYN QDKMICRKCY
101: ARLHPRAVNC RKKKCGHSNQ LRPKKKIK

Arabidopsis Description

RPL40BUbiquitin-60S ribosomal protein L40-1 [Source:UniProtKB/Swiss-Prot;Acc:B9DHA6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.