Factsheet for TraesCS5B01G524700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G524500.1	Wheat	cytosol	60.43	84.0
TraesCS5B01G524600.1	Wheat	cytosol	82.73	83.94
TraesCS7B01G366400.1	Wheat	cytosol	37.41	67.53
TraesCS4B01G008400.1	Wheat	cytosol	61.87	66.67
TraesCS4B01G218100.1	Wheat	cytosol	60.43	63.64
TraesCS7B01G390800.1	Wheat	cytosol	62.59	62.59
TraesCS7B01G390900.1	Wheat	cytosol	62.59	62.59
TraesCS5B01G260700.1	Wheat	cytosol	59.71	61.48
TraesCS4B01G218000.1	Wheat	cytosol	58.27	61.36
HORVU4Hr1G061980.1	Barley	cytosol	52.52	60.83
TraesCS2B01G480300.1	Wheat	cytosol	61.87	60.56
TraesCS2B01G480400.1	Wheat	cytosol	61.87	60.56
TraesCS1B01G241200.1	Wheat	cytosol	60.43	60.43
KXG39742	Sorghum	cytosol	61.87	60.14
TraesCS6B01G176400.1	Wheat	cytosol	58.27	60.0
TraesCS4B01G233100.1	Wheat	cytosol	61.87	55.84
TraesCS2B01G480500.1	Wheat	cytosol	53.24	53.62
TraesCS2B01G480600.1	Wheat	cytosol	51.8	52.17
TraesCS5B01G187200.1	Wheat	cytosol	52.52	51.41
TraesCS2B01G107800.1	Wheat	cytosol	53.24	48.37
TraesCS2B01G107600.1	Wheat	cytosol	48.2	47.86
TraesCS1B01G425700.1	Wheat	cytosol	43.17	38.71
TraesCS1B01G130900.1	Wheat	cytosol	43.17	38.71
TraesCS1B01G182700.1	Wheat	cytosol	43.88	37.65
TraesCS7B01G366700.1	Wheat	cytosol	41.01	37.25
TraesCS7B01G366600.1	Wheat	cytosol	41.01	36.54
TraesCS7B01G413800.1	Wheat	cytosol	38.85	35.29
TraesCS5B01G222800.1	Wheat	cytosol	38.85	35.29
TraesCS6B01G176000.1	Wheat	cytosol	38.13	34.64
TraesCS6B01G115100.1	Wheat	cytosol	40.29	32.0
TraesCS7B01G366800.1	Wheat	cytosol	41.73	30.37
TraesCS6B01G164700.2	Wheat	cytosol	45.32	27.51
TraesCS6B01G164600.1	Wheat	cytosol	45.32	27.51
TraesCS6B01G148000.2	Wheat	cytosol	45.32	26.47
TraesCS3B01G572400.1	Wheat	cytosol, mitochondrion	25.9	23.68
TraesCS3B01G043200.1	Wheat	cytosol	23.74	23.24
TraesCS7B01G354200.1	Wheat	cytosol	45.32	22.5
TraesCS6B01G110300.1	Wheat	cytosol	43.17	22.22
TraesCS6B01G012500.1	Wheat	cytosol	36.69	20.82
TraesCS3B01G568900.1	Wheat	mitochondrion	20.86	20.71
TraesCS7B01G354000.2	Wheat	cytosol	46.04	20.71
TraesCS7B01G354100.1	Wheat	cytosol	45.32	20.66
TraesCS3B01G567200.1	Wheat	mitochondrion	33.09	20.54
TraesCS3B01G567300.1	Wheat	mitochondrion	30.94	19.72
TraesCS6B01G293300.1	Wheat	plastid	41.01	18.69
TraesCS4B01G389100.1	Wheat	endoplasmic reticulum	27.34	18.01
TraesCS7B01G367600.1	Wheat	cytosol	38.85	17.94
TraesCS3B01G567800.1	Wheat	mitochondrion	27.34	16.96
TraesCS3B01G569000.1	Wheat	mitochondrion	27.34	16.96
TraesCS3B01G061600.1	Wheat	cytosol	26.62	14.92
TraesCS3B01G567100.1	Wheat	nucleus	31.65	14.81
TraesCS4B01G387300.1	Wheat	cytosol	33.09	14.29
TraesCS7B01G004300.1	Wheat	cytosol	22.3	14.22
TraesCS3B01G567400.1	Wheat	cytosol	30.22	14.14
TraesCS3B01G568000.1	Wheat	cytosol	29.5	13.76
TraesCS3B01G569700.1	Wheat	cytosol	30.22	13.08
TraesCS7B01G486200.1	Wheat	cytosol	23.74	11.34
TraesCS1B01G325300.1	Wheat	cytosol	30.22	10.58
TraesCS5B01G386500.1	Wheat	nucleus	23.74	8.55
TraesCS6B01G164900.1	Wheat	cytosol	7.91	7.19
TraesCS6B01G140600.1	Wheat	cytosol	7.91	7.19
TraesCS7B01G367700.1	Wheat	cytosol	7.91	7.19
TraesCS7B01G381800.1	Wheat	cytosol	7.91	7.19
TraesCS2B01G426500.1	Wheat	cytosol	7.91	7.19
TraesCS5B01G080200.1	Wheat	cytosol	7.91	7.19
TraesCS5B01G387000.1	Wheat	cytosol	25.9	5.26
TraesCS7B01G044300.1	Wheat	cytosol	1.44	3.17
TraesCS5B01G386900.1	Wheat	cytosol	0.72	0.25

Protein Annotations

Gene3D:2.20.28.70	Gene3D:3.10.20.90	MapMan:35.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR000626	InterPro:IPR038587	InterPro:L40e_sf	PFAM:PF00240	PFAM:PF01020
PRINTS:PR00348	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF255	InterPro:Ribosomal_L40e	InterPro:Ribosomal_zn-bd
SMART:SM00213	SMART:SM01377	SUPFAM:SSF54236	SUPFAM:SSF57829	EnsemblPlantsGene:TraesCS5B01G524700	EnsemblPlants:TraesCS5B01G524700.1
InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	:	:	:

Description

No Description!

Coordinates

chr5B:-:684971097..684980340

Molecular Weight (calculated)

15899.2 Da

IEP (calculated)

10.200

GRAVY (calculated)

-0.804

Length

139 amino acids

Sequence
(BLAST)

001: MQIFVKTPTG KTVILEVERT DTIGNVKAKI DGEEGVSPEQ QRLIFGGKPL EDDRSLAEYD VHKDSTLHLL LHLPGGFRGR EGGWFTDPSM RALAESYSRN
101: KKICRKCYAR LPPRATNCRK KKCGHSTQLR QKKIWRPYD

Best Arabidopsis Sequence Match ( AT2G36170.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGIIEP SLMMLARKYN QDKMICRKCY
101: ARLHPRAVNC RKKKCGHSNQ LRPKKKIK

Arabidopsis Description

RPL40BUbiquitin-60S ribosomal protein L40-1 [Source:UniProtKB/Swiss-Prot;Acc:B9DHA6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.