Factsheet for TraesCS3B01G567800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G569000.1	Wheat	mitochondrion	75.45	75.45
TraesCS3B01G568900.1	Wheat	mitochondrion	44.2	70.71
TraesCS3D01G511200.1	Wheat	cytosol	62.05	62.61
TraesCS3B01G567200.1	Wheat	mitochondrion	57.59	57.59
TraesCS3B01G572400.1	Wheat	cytosol, mitochondrion	38.84	57.24
TraesCS3B01G567300.1	Wheat	mitochondrion	55.36	56.88
TraesCS7B01G366700.1	Wheat	cytosol	37.5	54.9
TraesCS7B01G366400.1	Wheat	cytosol	18.75	54.55
TraesCS7B01G366600.1	Wheat	cytosol	37.95	54.49
KXG28223	Sorghum	mitochondrion	48.66	50.7
TraesCS5B01G222800.1	Wheat	cytosol	32.14	47.06
TraesCS7B01G413800.1	Wheat	cytosol	32.14	47.06
TraesCS6B01G115100.1	Wheat	cytosol	36.61	46.86
TraesCS6B01G176000.1	Wheat	cytosol	31.7	46.41
TraesCS3B01G567400.1	Wheat	cytosol	59.38	44.78
TraesCS3B01G569700.1	Wheat	cytosol	63.84	44.55
TraesCS7B01G366800.1	Wheat	cytosol	37.5	43.98
TraesCS3B01G567100.1	Wheat	nucleus	57.14	43.1
TraesCS3B01G568000.1	Wheat	cytosol	55.8	41.95
TraesCS4B01G008400.1	Wheat	cytosol	23.66	41.09
TraesCS4B01G218000.1	Wheat	cytosol	23.66	40.15
TraesCS3B01G043200.1	Wheat	cytosol	25.0	39.44
TraesCS4B01G218100.1	Wheat	cytosol	23.21	39.39
TraesCS6B01G293300.1	Wheat	plastid	51.34	37.7
TraesCS6B01G164600.1	Wheat	cytosol	38.39	37.55
TraesCS6B01G164700.2	Wheat	cytosol	37.95	37.12
TraesCS5B01G260700.1	Wheat	cytosol	22.32	37.04
TraesCS1B01G241200.1	Wheat	cytosol	22.77	36.69
TraesCS7B01G390900.1	Wheat	cytosol	22.77	36.69
TraesCS7B01G390800.1	Wheat	cytosol	22.77	36.69
TraesCS7B01G044300.1	Wheat	cytosol	10.27	36.51
TraesCS6B01G176400.1	Wheat	cytosol	21.88	36.3
TraesCS6B01G148000.2	Wheat	cytosol	38.39	36.13
TraesCS2B01G480400.1	Wheat	cytosol	22.77	35.92
TraesCS2B01G480300.1	Wheat	cytosol	22.77	35.92
TraesCS5B01G524500.1	Wheat	cytosol	15.62	35.0
TraesCS1B01G425700.1	Wheat	cytosol	24.11	34.84
TraesCS1B01G130900.1	Wheat	cytosol	24.11	34.84
TraesCS1B01G182700.1	Wheat	cytosol	25.0	34.57
TraesCS4B01G233100.1	Wheat	cytosol	23.66	34.42
TraesCS5B01G187200.1	Wheat	cytosol	20.98	33.1
TraesCS2B01G480500.1	Wheat	cytosol	20.09	32.61
TraesCS2B01G480600.1	Wheat	cytosol	20.09	32.61
TraesCS6B01G110300.1	Wheat	cytosol	37.95	31.48
TraesCS7B01G354200.1	Wheat	cytosol	38.39	30.71
TraesCS3B01G061600.1	Wheat	cytosol	32.59	29.44
TraesCS7B01G354100.1	Wheat	cytosol	38.39	28.2
TraesCS6B01G012500.1	Wheat	cytosol	30.8	28.16
TraesCS6B01G140600.1	Wheat	cytosol	19.2	28.1
TraesCS7B01G367700.1	Wheat	cytosol	19.2	28.1
TraesCS5B01G080200.1	Wheat	cytosol	19.2	28.1
TraesCS6B01G164900.1	Wheat	cytosol	19.2	28.1
TraesCS7B01G381800.1	Wheat	cytosol	19.2	28.1
TraesCS2B01G426500.1	Wheat	cytosol	19.2	28.1
TraesCS5B01G524600.1	Wheat	cytosol	16.96	27.74
TraesCS5B01G524700.1	Wheat	cytosol	16.96	27.34
TraesCS2B01G107800.1	Wheat	cytosol	18.3	26.8
TraesCS2B01G107600.1	Wheat	cytosol	16.52	26.43
CDX79728	Canola	cytosol	25.89	25.55
TraesCS7B01G354000.2	Wheat	cytosol	33.93	24.6
TraesCS7B01G004300.1	Wheat	cytosol	22.77	23.39
TraesCS7B01G367600.1	Wheat	cytosol	31.25	23.26
TraesCS4B01G387300.1	Wheat	cytosol	31.25	21.74
TraesCS4B01G389100.1	Wheat	endoplasmic reticulum	19.2	20.38
TraesCS7B01G486200.1	Wheat	cytosol	25.45	19.59
TraesCS5B01G386500.1	Wheat	nucleus	27.68	16.06
TraesCS1B01G325300.1	Wheat	cytosol	27.23	15.37
TraesCS5B01G387000.1	Wheat	cytosol	32.59	10.67
TraesCS5B01G386900.1	Wheat	cytosol	6.7	3.8

Protein Annotations

EnsemblPlants:TraesCS3B01G567800.1	EnsemblPlantsGene:TraesCS3B01G567800	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF242
PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	SMART:SM00213	SUPFAM:SSF54236	MapMan:35.1

Description

No Description!

Coordinates

chr3B:+:799303474..799304148

Molecular Weight (calculated)

25286.9 Da

IEP (calculated)

6.758

GRAVY (calculated)

-0.027

Length

224 amino acids

Sequence
(BLAST)

001: MYILVKNPAD RMIRLRVRPL HTLGDVKTMI QQRHFLVSNG VQLDDNCTLA DYNIQHESTL ELQEKMHICV TETLMNRTIP LDVDSLDTID DVKANIYGLQ
101: GFPSAQQCLI FAGKRLEEGN RTLADHNIVM ESTILLVLLP CISRGDMMQI HTKSLSGKTI SLEVGSLDTV ESVMVKLYEK NFASYPSQQR LIFAGKTLEI
201: RRTLAYYNIC SDSTLRCVPC LCGC

Best Arabidopsis Sequence Match ( AT4G02890.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.