CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 1
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83265	Sorghum	cytosol	60.47	58.82
HORVU3Hr1G110900.1	Barley	cytosol	59.53	56.89
TraesCS3A01G504300.1	Wheat	cytosol	40.47	55.41
TraesCS3A01G504200.1	Wheat	cytosol	39.53	54.14
EER89210	Sorghum	cytosol	19.07	51.9
TraesCS3B01G568900.1	Wheat	mitochondrion	33.49	51.43
TraesCS3B01G569000.1	Wheat	mitochondrion	52.56	50.45
TraesCS3D01G511200.1	Wheat	cytosol	51.16	49.55
TraesCS3B01G567800.1	Wheat	mitochondrion	50.7	48.66
EER88734	Sorghum	cytosol	33.95	47.71
EER96746	Sorghum	cytosol	33.95	47.71
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	61.86	44.93
TraesCS3A01G504000.1	Wheat	cytosol	60.93	43.96
TraesCS3D01G511000.1	Wheat	cytosol	59.53	43.24
TraesCS3D01G510300.2	Wheat	nucleus	59.53	43.1
TraesCS3B01G567100.1	Wheat	nucleus	59.53	43.1
TraesCS3D01G510900.1	Wheat	nucleus	59.07	42.62
TraesCS3A01G504600.1	Wheat	nucleus	59.07	42.62
HORVU3Hr1G110970.1	Barley	cytosol, nucleus, plastid	56.28	41.3
TraesCS3B01G567400.1	Wheat	cytosol	56.28	40.74
KXG38689	Sorghum	cytosol	25.12	39.42
EES01965	Sorghum	cytosol	55.81	39.34
EER96363	Sorghum	cytosol	21.86	36.43
EER92591	Sorghum	cytosol	21.86	36.43
OQU90737	Sorghum	cytosol	26.51	32.57
KXG35893	Sorghum	cytosol	21.4	32.39
EER97248	Sorghum	cytosol	20.47	32.35
KXG20618	Sorghum	cytosol, plastid	40.93	32.23
EER99330	Sorghum	cytosol	21.4	32.17
EES17768	Sorghum	cytosol	22.79	31.61
EES02888	Sorghum	cytosol	22.79	31.61
EER97249	Sorghum	cytosol	20.47	31.21
OQU89356	Sorghum	cytosol	20.0	30.94
EES11473	Sorghum	cytosol	20.47	28.76
CDX79728	Canola	cytosol	27.44	25.99
KXG29531	Sorghum	cytosol	53.49	25.16
KXG39742	Sorghum	cytosol	16.28	24.48
KXG38267	Sorghum	cytosol	18.14	24.38
KXG29530	Sorghum	cytosol	39.53	22.31
EER90271	Sorghum	cytosol	39.53	22.31
KXG29523	Sorghum	cytosol	39.53	22.31
KXG20644	Sorghum	cytosol	39.53	22.31
OQU89357	Sorghum	cytosol, extracellular	13.02	22.22
OQU76939	Sorghum	cytosol, plastid	40.93	19.34
EES05681	Sorghum	cytosol	39.53	18.52

Protein Annotations

EnsemblPlants:KXG28223	EnsemblPlantsGene:SORBI_3005G099400	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF238
PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ProteinID:KXG28223	ProteinID:KXG28223.1	SMART:SM00213
SUPFAM:SSF54236	UniParc:UPI0003C64DAF	UniProt:A0A1B6PRE7	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr5:-:16259568..16261701

Molecular Weight (calculated)

24557.6 Da

IEP (calculated)

4.833

GRAVY (calculated)

-0.309

Length

215 amino acids

Sequence
(BLAST)

001: MYIFVKSSIS RTIRLRVQPT DTLSTVKAKI QEQYYLAFDG EQLDDNLTLA DYDIQNRSTL DLEEKMEIYV QETLLGTKIT VEVDSLDTIG NVKDMIESIE
101: GFPKHQQCLL FDKKQLEDNS TIADNNICKE ATLLLVLHSS PRGTMQIFVE TILRTLALEV NSTDTISNVK MMIYKKEGTR PNKQRLLFAG QQLQNDRTLG
201: DYGIKNETTL HLVLC

Best Arabidopsis Sequence Match ( AT4G02890.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.