CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G381800.1	Wheat	cytosol	98.69	98.69
TraesCS6B01G164900.1	Wheat	cytosol	98.69	98.69
TraesCS6B01G140600.1	Wheat	cytosol	98.69	98.69
TraesCS6A01G112400.1	Wheat	cytosol	98.69	98.69
TraesCS5B01G080200.1	Wheat	cytosol	98.69	98.69
TraesCS2B01G426500.1	Wheat	cytosol	98.04	98.04
GSMUA_AchrUn_...	Banana	cytosol	59.48	97.85
CDY70361	Canola	cytosol	66.67	97.14
TraesCS7A01G453400.1	Wheat	cytosol	96.08	96.71
CDX95544	Canola	cytosol	42.48	84.42
TraesCS2D01G474700.1	Wheat	cytosol	42.48	84.42
AT4G05050.2	Thale cress	cytosol	98.04	65.5
KRH19844	Soybean	cytosol	98.04	65.22
KXG20618	Sorghum	cytosol, plastid	98.04	54.95
EES01965	Sorghum	cytosol	98.69	49.51
KXG20644	Sorghum	cytosol	98.04	39.37
KXG29523	Sorghum	cytosol	98.04	39.37
KXG29530	Sorghum	cytosol	98.04	39.37
EER90271	Sorghum	cytosol	98.04	39.37
Os06t0673500-01	Rice	cytosol	50.33	36.84
OQU76939	Sorghum	cytosol, plastid	98.04	32.97
EES05681	Sorghum	cytosol	98.04	32.68
EER96746	Sorghum	cytosol	31.37	31.37
EER88734	Sorghum	cytosol	31.37	31.37
KXG29531	Sorghum	cytosol	93.46	31.29
KXG38689	Sorghum	cytosol	25.49	28.47
TraesCS5A01G292600.1	Wheat	cytosol	29.41	26.47
OQU90737	Sorghum	cytosol	29.41	25.71
KXG28223	Sorghum	mitochondrion	28.76	20.47
OQU83265	Sorghum	cytosol	18.3	12.67
EES17768	Sorghum	cytosol	12.42	12.26
EES02888	Sorghum	cytosol	11.76	11.61
KXG38267	Sorghum	cytosol	11.76	11.25
OQU89357	Sorghum	cytosol, extracellular	9.15	11.11
KXG35893	Sorghum	cytosol	9.8	10.56
EER97249	Sorghum	cytosol	9.15	9.93
EER96363	Sorghum	cytosol	7.84	9.3
EER92591	Sorghum	cytosol	7.84	9.3
KXG39742	Sorghum	cytosol	8.5	9.09
EER99330	Sorghum	cytosol	8.5	9.09
OQU89356	Sorghum	cytosol	7.84	8.63
EER97248	Sorghum	cytosol	6.54	7.35
EER89210	Sorghum	cytosol	0.0	0.0

Protein Annotations

MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EntrezGene:8074742	UniProt:C5YGJ5	EnsemblPlants:EES11473	ProteinID:EES11473
ProteinID:EES11473.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000626	PFAM:PF00240
PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF242	SMART:SM00213
EnsemblPlantsGene:SORBI_3006G224400	SUPFAM:SSF54236	unigene:Sbi.2810	UniParc:UPI0001A86CCE	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf
InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	RefSeq:XP_002447145.1	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:57035344..57037800

Molecular Weight (calculated)

17132.7 Da

IEP (calculated)

7.685

GRAVY (calculated)

-0.465

Length

153 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL DDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKSIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGQ

Best Arabidopsis Sequence Match ( AT4G05050.4 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGF

Arabidopsis Description

UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.