CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11473	Sorghum	cytosol	49.51	98.69
TraesCSU01G019400.1	Wheat	cytosol	49.84	98.06
EER89210	Sorghum	cytosol	24.59	94.94
AT1G55060.1	Thale cress	cytosol	70.49	93.48
TraesCSU01G018900.1	Wheat	endoplasmic reticulum, extracellular	75.74	92.4
HORVU6Hr1G016150.3	Barley	cytosol	58.03	91.71
KXG20618	Sorghum	cytosol, plastid	78.36	87.55
EER88734	Sorghum	cytosol	40.66	81.05
EER96746	Sorghum	cytosol	40.66	81.05
Zm00001d053834_P002	Maize	cytosol, plastid	97.38	77.95
TraesCS7B01G354100.1	Wheat	cytosol	75.08	75.08
TraesCS7A01G453300.1	Wheat	cytosol	74.75	75.0
KRG91230	Soybean	cytosol	74.75	74.75
EER96363	Sorghum	cytosol	28.85	68.22
EER92591	Sorghum	cytosol	28.85	68.22
KXG29531	Sorghum	cytosol	97.38	64.99
EER99330	Sorghum	cytosol	28.85	61.54
EES17768	Sorghum	cytosol	31.15	61.29
EER97248	Sorghum	cytosol	27.21	61.03
EER97249	Sorghum	cytosol	28.2	60.99
EES02888	Sorghum	cytosol	30.82	60.65
KXG35893	Sorghum	cytosol	28.2	60.56
KXG38689	Sorghum	cytosol	26.89	59.85
KXG29530	Sorghum	cytosol	74.75	59.84
EER90271	Sorghum	cytosol	74.75	59.84
KXG29523	Sorghum	cytosol	74.75	59.84
KXG20644	Sorghum	cytosol	74.75	59.84
OQU89356	Sorghum	cytosol	27.21	59.71
KXG28223	Sorghum	mitochondrion	39.34	55.81
Os06t0681400-01	Rice	cytosol	99.67	54.68
OQU76939	Sorghum	cytosol, plastid	77.7	52.09
OQU83265	Sorghum	cytosol	37.05	51.13
OQU90737	Sorghum	cytosol	28.52	49.71
EES05681	Sorghum	cytosol	74.75	49.67
KXG39742	Sorghum	cytosol	23.28	49.65
KXG38267	Sorghum	cytosol	22.62	43.12
OQU89357	Sorghum	cytosol, extracellular	17.7	42.86

Protein Annotations

MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EntrezGene:8079792	UniProt:C5XG97	EnsemblPlants:EES01965	ProteinID:EES01965
ProteinID:EES01965.1	ProteinID:EES06323.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000626
ProteinID:KXG20645.1	ProteinID:KXG29524.1	ProteinID:KXG29526.1	ProteinID:KXG29527.1	ProteinID:KXG29529.1	ProteinID:OQU84420.1
PFAM:PF00240	PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR45095	PANTHER:PTHR45095:SF2
SMART:SM00213	EnsemblPlantsGene:SORBI_3003G403700	SUPFAM:SSF54236	unigene:Sbi.20114	unigene:Sbi.20992	UniParc:UPI00000A42B4
InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	RefSeq:XP_002453347.1	RefSeq:XP_002456845.1

Description

hypothetical protein

Coordinates

chr3:+:71157775..71160220

Molecular Weight (calculated)

34175.3 Da

IEP (calculated)

7.816

GRAVY (calculated)

-0.455

Length

305 amino acids

Sequence
(BLAST)

Best Arabidopsis Sequence Match ( AT4G05320.2 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS
401: DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGF

Arabidopsis Description

UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.