CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0177g00070.t01	Wine grape	cytosol	99.35	99.78
EER90271	Sorghum	cytosol	82.79	99.74
KXG29530	Sorghum	cytosol	82.79	99.74
KXG29523	Sorghum	cytosol	82.79	99.74
KXG20644	Sorghum	cytosol	82.79	99.74
TraesCS2D01G405500.1	Wheat	cytosol	48.8	98.25
EES11473	Sorghum	cytosol	32.68	98.04
TraesCS2A01G408200.1	Wheat	cytosol	34.42	96.93
TraesCS6A01G087100.1	Wheat	cytosol	48.15	96.51
EER89210	Sorghum	cytosol	16.34	94.94
AT1G65350.1	Thale cress	cytosol	65.14	93.73
OQU76939	Sorghum	cytosol, plastid	82.79	83.52
KXG20618	Sorghum	cytosol, plastid	49.46	83.15
Solyc07g064130.1.1	Tomato	nucleus	82.57	82.93
EER88734	Sorghum	cytosol	27.02	81.05
EER96746	Sorghum	cytosol	27.02	81.05
PGSC0003DMT400027156	Potato	cytosol	66.23	79.79
EES01965	Sorghum	cytosol	49.67	74.75
KRH50099	Soybean	cytosol, endoplasmic reticulum, nucleus	82.79	71.29
KRH20401	Soybean	cytosol	82.79	71.29
EER92591	Sorghum	cytosol	19.61	69.77
EER96363	Sorghum	cytosol	19.61	69.77
EER99330	Sorghum	cytosol	19.61	62.94
Os02t0161900-01	Rice	extracellular, vacuole	66.23	62.81
EER97248	Sorghum	cytosol	18.52	62.5
EER97249	Sorghum	cytosol	19.17	62.41
KXG35893	Sorghum	cytosol	19.17	61.97
EES17768	Sorghum	cytosol	20.7	61.29
OQU89356	Sorghum	cytosol	18.52	61.15
EES02888	Sorghum	cytosol	20.48	60.65
KXG38689	Sorghum	cytosol	17.86	59.85
Zm00001d015327_P001	Maize	cytosol	65.58	56.47
KXG39742	Sorghum	cytosol	15.9	51.05
KRH20404	Soybean	cytosol	49.67	49.89
KXG29531	Sorghum	cytosol	49.67	49.89
OQU90737	Sorghum	cytosol	18.95	49.71
OQU89357	Sorghum	cytosol, extracellular	12.2	44.44
KXG38267	Sorghum	cytosol	15.03	43.12
KXG28223	Sorghum	mitochondrion	18.52	39.53
OQU83265	Sorghum	cytosol	16.56	34.39

Protein Annotations

MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EntrezGene:8073180	UniProt:C5Y0G2	EnsemblPlants:EES05681	ProteinID:EES05681
ProteinID:EES05681.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000626	PFAM:PF00240
PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR45095	PANTHER:PTHR45095:SF2	SMART:SM00213
EnsemblPlantsGene:SORBI_3004G273300	SUPFAM:SSF54236	unigene:Sbi.18599	UniParc:UPI0001A85E05	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf
InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	RefSeq:XP_002452705.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:61708312..61711240

Molecular Weight (calculated)

51431.2 Da

IEP (calculated)

8.656

GRAVY (calculated)

-0.450

Length

459 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS
401: DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGRVN

Best Arabidopsis Sequence Match ( AT4G05320.2 )
(BLAST)

Arabidopsis Description

UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.