Factsheet for TraesCS2A01G408200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G465300.1	Wheat	cytosol, golgi	46.01	97.4
TraesCS2A01G475100.1	Wheat	cytosol	44.79	94.81
TraesCS7A01G466500.1	Wheat	cytosol	92.02	93.75
TraesCS5A01G073800.1	Wheat	cytosol	46.63	92.68
TraesCS6A01G087800.1	Wheat	extracellular	92.64	88.3
TraesCS7A01G506300.1	Wheat	cytosol, plastid	75.46	80.39
TraesCS5A01G224000.1	Wheat	cytosol	74.85	79.74
TraesCS6A01G147500.1	Wheat	cytosol	74.23	79.08
TraesCS1A01G202800.1	Wheat	cytosol	73.01	76.77
TraesCS7A01G141700.1	Wheat	cytosol	73.01	76.77
TraesCS7A01G453500.1	Wheat	cytosol	75.46	71.93
TraesCS4A01G086300.1	Wheat	cytosol	52.15	70.83
TraesCS6B01G164600.1	Wheat	cytosol	96.93	69.0
TraesCS2D01G405500.1	Wheat	cytosol	96.32	68.86
TraesCS4A01G306500.1	Wheat	cytosol	52.76	66.67
TraesCS2A01G408500.1	Wheat	cytosol	93.25	66.38
TraesCS7A01G453600.1	Wheat	cytosol	96.32	66.24
TraesCS6A01G087100.1	Wheat	cytosol	92.64	65.94
TraesCS7A01G465600.1	Wheat	cytosol	92.02	65.5
TraesCS5A01G551700.1	Wheat	cytosol	63.8	65.0
TraesCS4A01G086400.1	Wheat	cytosol	50.92	62.88
TraesCS3A01G503800.1	Wheat	cytosol	47.24	62.6
TraesCS3A01G504200.1	Wheat	cytosol	59.51	61.78
TraesCS3A01G504300.1	Wheat	cytosol	59.51	61.78
TraesCS6A01G148100.1	Wheat	cytosol	50.31	60.74
TraesCS7A01G487500.1	Wheat	cytosol	50.92	59.71
TraesCS7A01G105400.1	Wheat	cytosol	52.76	59.31
TraesCS7A01G466200.1	Wheat	cytosol	53.37	59.18
TraesCS2A01G458100.1	Wheat	cytosol	51.53	59.15
TraesCS2A01G458000.1	Wheat	cytosol	51.53	59.15
TraesCS7A01G105500.1	Wheat	cytosol	48.47	57.66
TraesCS1A01G105400.1	Wheat	cytosol	54.6	57.42
TraesCS1A01G397400.1	Wheat	cytosol	54.6	57.42
TraesCS1A01G397500.1	Wheat	golgi, unclear	54.6	57.42
TraesCS3A01G040300.1	Wheat	cytosol	54.6	57.05
TraesCS4A01G077000.1	Wheat	cytosol	52.76	54.43
TraesCS1A01G166000.1	Wheat	unclear	53.99	54.32
TraesCS6A01G136700.1	Wheat	cytosol	50.31	53.59
TraesCS6A01G112400.1	Wheat	cytosol	50.31	53.59
TraesCS7A01G453400.1	Wheat	cytosol	49.69	53.29
TraesCS7A01G453300.1	Wheat	cytosol	96.93	51.97
TraesCS2A01G458800.1	Wheat	cytosol	43.56	51.45
TraesCS2A01G458600.1	Wheat	cytosol	42.94	50.36
AT1G65350.1	Thale cress	cytosol	96.32	49.22
TraesCS5A01G196400.1	Wheat	cytosol	42.94	48.95
TraesCS1A01G227100.1	Wheat	cytosol	50.31	48.52
TraesCS6A01G266000.1	Wheat	cytosol	96.93	48.47
TraesCS3A01G504500.1	Wheat	cytosol	66.26	48.21
HORVU5Hr1G019590.12	Barley	extracellular	96.93	48.02
TraesCS5A01G196700.1	Wheat	cytosol	39.26	47.41
TraesCS5A01G292600.1	Wheat	cytosol	49.08	47.06
TraesCS3A01G504100.1	Wheat	cytosol, mitochondrion	63.8	46.43
TraesCS3A01G504400.1	Wheat	cytosol	62.58	45.54
TraesCS7A01G027400.1	Wheat	cytosol	60.74	45.41
TraesCS6A01G119700.2	Wheat	cytosol	58.9	41.92
PGSC0003DMT400027156	Potato	cytosol	96.93	41.47
KXG29523	Sorghum	cytosol	96.93	41.47
TraesCS2A01G093300.1	Wheat	cytosol	36.2	40.14
TraesCS3A01G040600.1	Wheat	cytosol	52.76	36.75
VIT_19s0177g00070.t01	Wine grape	cytosol	96.93	34.57
EES05681	Sorghum	cytosol	96.93	34.42
Solyc07g064130.1.1	Tomato	nucleus	96.32	34.35
TraesCS3A01G504600.1	Wheat	nucleus	62.58	34.23
TraesCS3A01G504000.1	Wheat	cytosol	60.74	33.22
Os02t0161900-01	Rice	extracellular, vacuole	96.93	32.64
TraesCS3A01G503700.1	Wheat	cytosol, mitochondrion	29.45	30.97
Zm00001d015327_P001	Maize	cytosol	96.93	29.64
KRH20404	Soybean	cytosol	71.17	25.38
KRH50099	Soybean	cytosol, endoplasmic reticulum, nucleus	71.17	21.76
KRH20401	Soybean	cytosol	71.17	21.76
TraesCS1A01G313500.3	Wheat	cytosol, plastid	58.9	16.19

Protein Annotations

EnsemblPlants:TraesCS2A01G408200.1	EnsemblPlantsGene:TraesCS2A01G408200	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	PANTHER:PTHR10666
PANTHER:PTHR10666:SF242	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ScanProsite:PS00299	SMART:SM00213
SUPFAM:SSF54236	TIGR:cd01803	MapMan:19.2.2.1.1	:	:	:

Description

No Description!

Coordinates

chr2A:-:665842282..665844294

Molecular Weight (calculated)

18255.1 Da

IEP (calculated)

8.475

GRAVY (calculated)

-0.467

Length

163 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GEGSKPCTLL RHG

Best Arabidopsis Sequence Match ( AT4G05050.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.