Factsheet for TraesCS1A01G313500.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
plastid 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G314000.1	Wheat	cytosol	94.94	95.42
TraesCS1B01G325300.1	Wheat	cytosol	63.41	94.71
TraesCSU01G124300.1	Wheat	cytosol	34.91	69.0
TraesCS7A01G466500.1	Wheat	cytosol	16.19	60.0
TraesCS2A01G408200.1	Wheat	cytosol	16.19	58.9
TraesCS7A01G465300.1	Wheat	cytosol, golgi	7.59	58.44
TraesCS6A01G087800.1	Wheat	extracellular	16.69	57.89
TraesCS7A01G453500.1	Wheat	cytosol	16.19	56.14
TraesCS2A01G475100.1	Wheat	cytosol	7.25	55.84
TraesCS5A01G073800.1	Wheat	cytosol	7.59	54.88
TraesCS7A01G506300.1	Wheat	cytosol, plastid	13.83	53.59
TraesCS5A01G224000.1	Wheat	cytosol	13.66	52.94
TraesCS6A01G147500.1	Wheat	cytosol	13.49	52.29
TraesCS2A01G408500.1	Wheat	cytosol	19.73	51.09
TraesCS1A01G202800.1	Wheat	cytosol	13.32	50.97
TraesCS7A01G141700.1	Wheat	cytosol	13.15	50.32
TraesCS7A01G465600.1	Wheat	cytosol	19.39	50.22
TraesCS7A01G453600.1	Wheat	cytosol	19.9	49.79
TraesCS6A01G087100.1	Wheat	cytosol	18.89	48.91
TraesCS6A01G112400.1	Wheat	cytosol	12.48	48.37
TraesCS6A01G136700.1	Wheat	cytosol	12.48	48.37
TraesCS7A01G453400.1	Wheat	cytosol	12.31	48.03
TraesCS6A01G119700.2	Wheat	cytosol	18.38	47.6
TraesCS3A01G504200.1	Wheat	cytosol	12.31	46.5
TraesCS7A01G105500.1	Wheat	cytosol	10.62	45.99
TraesCS5A01G551700.1	Wheat	cytosol	12.31	45.62
TraesCS3A01G503800.1	Wheat	cytosol	9.44	45.53
TraesCS7A01G105400.1	Wheat	cytosol	11.13	45.52
TraesCS3A01G504300.1	Wheat	cytosol	11.97	45.22
TraesCS4A01G086300.1	Wheat	cytosol	9.11	45.0
TraesCS4A01G306500.1	Wheat	cytosol	9.27	42.64
TraesCS5A01G292600.1	Wheat	cytosol	11.97	41.76
TraesCS3A01G040300.1	Wheat	cytosol	10.79	41.03
TraesCS7A01G466200.1	Wheat	cytosol	10.12	40.82
TraesCS4A01G086400.1	Wheat	cytosol	8.94	40.15
TraesCS6A01G148100.1	Wheat	cytosol	9.11	40.0
TraesCS3A01G504500.1	Wheat	cytosol	14.84	39.29
TraesCS3A01G504100.1	Wheat	cytosol, mitochondrion	14.84	39.29
TraesCS7A01G453300.1	Wheat	cytosol	20.07	39.14
TraesCS2A01G458000.1	Wheat	cytosol	9.27	38.73
TraesCS7A01G487500.1	Wheat	cytosol	8.94	38.13
TraesCS1A01G105400.1	Wheat	cytosol	9.95	38.06
TraesCS1A01G397500.1	Wheat	golgi, unclear	9.95	38.06
TraesCS1A01G397400.1	Wheat	cytosol	9.95	38.06
TraesCS2A01G458100.1	Wheat	cytosol	9.11	38.03
TraesCS3A01G504400.1	Wheat	cytosol	14.33	37.95
TraesCS7A01G027400.1	Wheat	cytosol	13.83	37.61
TraesCS1A01G166000.1	Wheat	unclear	10.12	37.04
TraesCS6A01G266000.1	Wheat	cytosol	20.07	36.5
TraesCS2A01G458800.1	Wheat	cytosol	8.43	36.23
TraesCS2A01G458600.1	Wheat	cytosol	8.26	35.25
CDX79728	Canola	cytosol	13.49	35.24
TraesCS5A01G196400.1	Wheat	cytosol	8.43	34.97
TraesCS4A01G077000.1	Wheat	cytosol	9.27	34.81
TraesCS5A01G196700.1	Wheat	cytosol	7.76	34.07
TraesCS1A01G227100.1	Wheat	cytosol	9.27	32.54
TraesCS3A01G040600.1	Wheat	cytosol	12.65	32.05
TraesCS3A01G503700.1	Wheat	cytosol, mitochondrion	8.26	31.61
TraesCS3A01G504000.1	Wheat	cytosol	15.18	30.2
TraesCS3A01G504600.1	Wheat	nucleus	14.84	29.53
TraesCS2A01G093300.1	Wheat	cytosol	6.75	27.21

Protein Annotations

EnsemblPlants:TraesCS1A01G313500.3	EnsemblPlantsGene:TraesCS1A01G313500	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	ncoils:Coil
PANTHER:PTHR45095	PANTHER:PTHR45095:SF2	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ScanProsite:PS00299
SEG:seg	SMART:SM00213	SUPFAM:SSF54236	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1A:-:505282778..505286202

Molecular Weight (calculated)

65974.4 Da

IEP (calculated)

5.932

GRAVY (calculated)

-0.297

Length

593 amino acids

Sequence
(BLAST)

001: MTSLLVSERN PNPLLALTTP SDSPLHELPV DPSLAHTATR IDLLCSRSRV TATTRKRGGK RPSVVSMSGG GPGALPLEFP SAEWRRVYDR LMGLLPQVEE
101: LAADRARLEE INRLSEAREK SLRARLLQAE ASRERWKAAY AELPPGANPK LAELQKRDLV DSEACEALSD PDNSQLKQVT SEDTNEMDLE QCTMQIFVKI
201: NCSNFRKKRK IHCLKTITLD VMGSDTIYDV KDKIRDKEGI PEGQQRLMFG SELLMDSGTL EYYNIEEEST LTLDLVPRGM HIFVKTLANK IMTIEVGGED
301: SIYIVKAKVY DETGICPGRQ RLIFAGNELE DGCTLADYNV QNESTLHIVF RLACQRDGMH IFVKTLTGKI MAIDVEGEDS LYSVKAKIFD ETGIPPGRQR
401: LIFAGKQLED GRTLADYNVH NECTIHLVVF HGLTCQRSGM HMHIIIRGLT DKIMTAVAEG EDTIYSVKVK VSAETGVPPD RQTLIFAGNV LEDGRTLADY
501: DVQHASTLHV VLRGVTRQRG GMRIFVRTVN GKEVIDRAFK PGQTIDDIKA WIYSELCILP DHQQLSDQGG APLAEEISCS CTLVLQIRPP GGQ

Best Arabidopsis Sequence Match ( AT4G05320.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG F

Arabidopsis Description

UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.