Factsheet for TraesCS5A01G551700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G465300.1	Wheat	cytosol, golgi	32.5	67.53
TraesCS2A01G475100.1	Wheat	cytosol	31.88	66.23
CDY23226	Canola	cytosol, nucleus, plastid	28.75	64.79
Bra033420.1-P	Field mustard	cytosol, nucleus, plastid	28.75	64.79
TraesCS5A01G073800.1	Wheat	cytosol	33.12	64.63
TraesCS7A01G466500.1	Wheat	cytosol	64.38	64.38
TraesCS2A01G408200.1	Wheat	cytosol	65.0	63.8
TraesCS6A01G087800.1	Wheat	extracellular	64.38	60.23
TraesCS7A01G506300.1	Wheat	cytosol, plastid	53.12	55.56
TraesCS5A01G224000.1	Wheat	cytosol	52.5	54.9
TraesCS6A01G147500.1	Wheat	cytosol	51.88	54.25
TraesCS1A01G202800.1	Wheat	cytosol	51.25	52.9
TraesCS7A01G141700.1	Wheat	cytosol	51.25	52.9
TraesCS3A01G504200.1	Wheat	cytosol	51.25	52.23
TraesCS3A01G503800.1	Wheat	cytosol	40.0	52.03
TraesCS3A01G504300.1	Wheat	cytosol	50.62	51.59
TraesCSU01G125900.1	Wheat	cytosol	98.12	50.32
TraesCS7A01G453500.1	Wheat	cytosol	53.75	50.29
TraesCS4A01G086300.1	Wheat	cytosol	37.5	50.0
Os06t0673500-01	Rice	cytosol	63.75	48.8
TraesCS7A01G105400.1	Wheat	cytosol	42.5	46.9
TraesCS4A01G306500.1	Wheat	cytosol	37.5	46.51
TraesCS3A01G040300.1	Wheat	cytosol	45.0	46.15
TraesCS4A01G086400.1	Wheat	cytosol	36.88	44.7
TraesCS6A01G148100.1	Wheat	cytosol	37.5	44.44
TraesCS7A01G105500.1	Wheat	cytosol	37.5	43.8
TraesCS2A01G458100.1	Wheat	cytosol	38.75	43.66
TraesCS2A01G458000.1	Wheat	cytosol	38.75	43.66
TraesCS7A01G453600.1	Wheat	cytosol	64.38	43.46
TraesCS6A01G087100.1	Wheat	cytosol	61.88	43.23
TraesCS7A01G465600.1	Wheat	cytosol	61.88	43.23
TraesCS2A01G408500.1	Wheat	cytosol	61.88	43.23
TraesCS7A01G487500.1	Wheat	cytosol	36.88	42.45
TraesCS6B01G012500.1	Wheat	cytosol	64.38	42.04
TraesCS2A01G458600.1	Wheat	cytosol	35.62	41.01
TraesCS7A01G466200.1	Wheat	cytosol	37.5	40.82
TraesCS1A01G397500.1	Wheat	golgi, unclear	39.38	40.65
TraesCS1A01G105400.1	Wheat	cytosol	39.38	40.65
TraesCS1A01G397400.1	Wheat	cytosol	39.38	40.65
TraesCS1A01G166000.1	Wheat	unclear	39.38	38.89
TraesCS5A01G196400.1	Wheat	cytosol	34.38	38.46
TraesCS2A01G458800.1	Wheat	cytosol	33.12	38.41
TraesCS3A01G504500.1	Wheat	cytosol	53.75	38.39
TraesCS4A01G077000.1	Wheat	cytosol	37.5	37.97
TraesCS5A01G292600.1	Wheat	cytosol	39.38	37.06
TraesCS5A01G196700.1	Wheat	cytosol	31.25	37.04
TraesCS3A01G504400.1	Wheat	cytosol	51.25	36.61
TraesCS3A01G504100.1	Wheat	cytosol, mitochondrion	50.62	36.16
TraesCS1A01G227100.1	Wheat	cytosol	36.88	34.91
TraesCS7A01G453300.1	Wheat	cytosol	65.0	34.21
TraesCS6A01G112400.1	Wheat	cytosol	31.88	33.33
TraesCS6A01G136700.1	Wheat	cytosol	31.88	33.33
TraesCS7A01G027400.1	Wheat	cytosol	45.0	33.03
TraesCS7A01G453400.1	Wheat	cytosol	31.25	32.89
TraesCS6A01G266000.1	Wheat	cytosol	65.0	31.9
TraesCS3A01G040600.1	Wheat	cytosol	43.12	29.49
TraesCS2A01G093300.1	Wheat	cytosol	26.88	29.25
TraesCS3A01G504600.1	Wheat	nucleus	53.12	28.52
TraesCS3A01G504000.1	Wheat	cytosol	51.88	27.85
TraesCS6A01G119700.2	Wheat	cytosol	38.75	27.07
TraesCS3A01G503700.1	Wheat	cytosol, mitochondrion	25.0	25.81
TraesCS1A01G313500.3	Wheat	cytosol, plastid	45.62	12.31

Protein Annotations

EnsemblPlants:TraesCS5A01G551700.1	EnsemblPlantsGene:TraesCS5A01G551700	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF238
PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	SMART:SM00213	SUPFAM:SSF54236	MapMan:35.1

Description

No Description!

Coordinates

chr5A:-:705223254..705224192

Molecular Weight (calculated)

18098.7 Da

IEP (calculated)

8.002

GRAVY (calculated)

-0.361

Length

160 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG RIVTLDVESS DTIGNVKAKI HHKEDFQPYQ QCLIFSGKRL EDGRTLADYG IQKGVTLHSE PRFPGPMQIF VKNLGGKTLT FNVQSSDTIR
101: SVKEKIQQVD GIDPASQRLI FSGWQLEDSF TLAEYNIQHE STFHLCLRLY SCAKCPGTHH

Best Arabidopsis Sequence Match ( AT4G05050.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.