Factsheet for TraesCS3A01G504400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G567200.1	Wheat	mitochondrion	89.29	89.29
TraesCS3B01G567300.1	Wheat	mitochondrion	83.93	86.24
TraesCS3A01G504500.1	Wheat	cytosol	84.82	84.82
TraesCS3A01G504100.1	Wheat	cytosol, mitochondrion	79.46	79.46
TraesCS3A01G503700.1	Wheat	cytosol, mitochondrion	50.45	72.9
HORVU3Hr1G111000.1	Barley	cytosol	48.21	70.59
TraesCS3A01G504300.1	Wheat	cytosol	45.98	65.61
TraesCS3A01G504200.1	Wheat	cytosol	45.54	64.97
TraesCS7A01G465300.1	Wheat	cytosol, golgi	22.32	64.94
TraesCS5A01G073800.1	Wheat	cytosol	23.66	64.63
TraesCS7A01G466500.1	Wheat	cytosol	45.98	64.38
TraesCS3A01G503800.1	Wheat	cytosol	35.27	64.23
TraesCS2A01G475100.1	Wheat	cytosol	21.88	63.64
TraesCS2A01G408200.1	Wheat	cytosol	45.54	62.58
TraesCS6A01G087800.1	Wheat	extracellular	45.54	59.65
TraesCS3D01G510200.1	Wheat	cytosol	58.04	57.78
TraesCS6A01G147500.1	Wheat	cytosol	37.95	55.56
TraesCS7A01G506300.1	Wheat	cytosol, plastid	37.95	55.56
TraesCS5A01G224000.1	Wheat	cytosol	37.5	54.9
TraesCS3A01G504600.1	Wheat	nucleus	70.98	53.36
TraesCS3A01G040300.1	Wheat	cytosol	36.61	52.56
TraesCS7A01G141700.1	Wheat	cytosol	36.16	52.26
TraesCS1A01G202800.1	Wheat	cytosol	36.16	52.26
TraesCS3A01G504000.1	Wheat	cytosol	68.3	51.34
TraesCS5A01G551700.1	Wheat	cytosol	36.61	51.25
TraesCS3A01G040600.1	Wheat	cytosol	52.23	50.0
TraesCS4A01G086300.1	Wheat	cytosol	26.34	49.17
TraesCS7A01G453500.1	Wheat	cytosol	37.5	49.12
TraesCS4A01G306500.1	Wheat	cytosol	26.34	45.74
TraesCS7A01G465600.1	Wheat	cytosol	44.2	43.23
TraesCS2A01G408500.1	Wheat	cytosol	44.2	43.23
TraesCS6A01G119700.2	Wheat	cytosol	43.75	42.79
TraesCS7A01G453600.1	Wheat	cytosol	45.09	42.62
TraesCS4A01G086400.1	Wheat	cytosol	25.0	42.42
TraesCS7A01G105500.1	Wheat	cytosol	25.89	42.34
TraesCS7A01G466200.1	Wheat	cytosol	27.68	42.18
TraesCS6A01G087100.1	Wheat	cytosol	42.86	41.92
TraesCS6A01G148100.1	Wheat	cytosol	25.0	41.48
TraesCS7A01G105400.1	Wheat	cytosol	26.79	41.38
TraesCS7A01G487500.1	Wheat	cytosol	25.45	41.01
TraesCS2A01G458100.1	Wheat	cytosol	25.89	40.85
TraesCS2A01G458000.1	Wheat	cytosol	25.89	40.85
TraesCS1A01G105400.1	Wheat	cytosol	27.68	40.0
TraesCS1A01G397500.1	Wheat	golgi, unclear	27.68	40.0
TraesCS1A01G397400.1	Wheat	cytosol	27.68	40.0
TraesCS1A01G166000.1	Wheat	unclear	27.68	38.27
TraesCS5A01G292600.1	Wheat	cytosol	28.57	37.65
TraesCS4A01G077000.1	Wheat	cytosol	26.34	37.34
TraesCS1A01G227100.1	Wheat	cytosol	26.34	34.91
TraesCS5A01G196400.1	Wheat	cytosol	21.88	34.27
TraesCS2A01G458600.1	Wheat	cytosol	20.98	33.81
TraesCS7A01G453300.1	Wheat	cytosol	45.54	33.55
TraesCS6A01G136700.1	Wheat	cytosol	22.77	33.33
TraesCS6A01G112400.1	Wheat	cytosol	22.77	33.33
TraesCS5A01G196700.1	Wheat	cytosol	20.09	33.33
TraesCS7A01G453400.1	Wheat	cytosol	22.32	32.89
TraesCS2A01G458800.1	Wheat	cytosol	20.09	32.61
TraesCS7A01G027400.1	Wheat	cytosol	31.25	32.11
TraesCS6A01G266000.1	Wheat	cytosol	45.54	31.29
TraesCS2A01G093300.1	Wheat	cytosol	18.75	28.57
CDX79728	Canola	cytosol	28.57	28.19
TraesCS1A01G313500.3	Wheat	cytosol, plastid	37.95	14.33

Protein Annotations

EnsemblPlants:TraesCS3A01G504400.1	EnsemblPlantsGene:TraesCS3A01G504400	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR45095	PANTHER:PTHR45095:SF2
PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	SMART:SM00213	SUPFAM:SSF54236	MapMan:35.1

Description

No Description!

Coordinates

chr3A:+:726458343..726459017

Molecular Weight (calculated)

25707.9 Da

IEP (calculated)

6.506

GRAVY (calculated)

-0.396

Length

224 amino acids

Sequence
(BLAST)

001: MHIFVKTPTG RTICLNVHSS DTLYTVKAKI QQQYRLSFDG VQLEDNHTLA DYGIQHDSTI DLREKMQIYV TETRAGRTII LEVDSLDTIG NVKSKIEDME
101: GFPKGQQCLI FANKQLEDDN RSLADHNIWK ESTLLLVLRT CRPGESRMMH IFVKTLEGKT LNLEVESSYT IENVKVKIYE QDGTCPMQQR IIFAGKHLQD
201: DLTLADYNIQ RESTLHVLKR LCGC

Best Arabidopsis Sequence Match ( AT4G02890.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.