Factsheet for TraesCS3A01G504300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G504200.1	Wheat	cytosol	79.62	79.62
TraesCS7A01G465300.1	Wheat	cytosol, golgi	31.21	63.64
TraesCS2A01G475100.1	Wheat	cytosol	29.94	61.04
TraesCS5A01G073800.1	Wheat	cytosol	31.85	60.98
TraesCS7A01G466500.1	Wheat	cytosol	61.15	60.0
TraesCS2A01G408200.1	Wheat	cytosol	61.78	59.51
TraesCS3A01G503800.1	Wheat	cytosol	45.22	57.72
TraesCS6A01G087800.1	Wheat	extracellular	61.15	56.14
TraesCS7A01G506300.1	Wheat	cytosol, plastid	52.23	53.59
TraesCS6A01G147500.1	Wheat	cytosol	52.23	53.59
TraesCS5A01G224000.1	Wheat	cytosol	51.59	52.94
HORVU3Hr1G110900.1	Barley	cytosol	75.16	52.44
TraesCS1A01G202800.1	Wheat	cytosol	50.32	50.97
TraesCS3A01G040300.1	Wheat	cytosol	50.32	50.64
TraesCS5A01G551700.1	Wheat	cytosol	51.59	50.62
TraesCS7A01G141700.1	Wheat	cytosol	49.68	50.32
TraesCS3A01G504100.1	Wheat	cytosol, mitochondrion	70.06	49.11
TraesCS3A01G504500.1	Wheat	cytosol	68.79	48.21
TraesCS7A01G453500.1	Wheat	cytosol	51.59	47.37
TraesCS3B01G567100.1	Wheat	nucleus	87.26	46.13
TraesCS3A01G504400.1	Wheat	cytosol	65.61	45.98
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	85.99	45.61
TraesCS4A01G086300.1	Wheat	cytosol	34.39	45.0
TraesCS4A01G306500.1	Wheat	cytosol	36.31	44.19
TraesCS7A01G105400.1	Wheat	cytosol	40.76	44.14
TraesCS7A01G105500.1	Wheat	cytosol	38.22	43.8
TraesCS3A01G504000.1	Wheat	cytosol	79.62	41.95
TraesCS2A01G408500.1	Wheat	cytosol	60.51	41.48
TraesCS3A01G504600.1	Wheat	nucleus	78.34	41.28
TraesCS7A01G453600.1	Wheat	cytosol	61.15	40.51
KXG28223	Sorghum	mitochondrion	55.41	40.47
TraesCS7A01G465600.1	Wheat	cytosol	58.6	40.17
TraesCS6A01G087100.1	Wheat	cytosol	58.6	40.17
TraesCS4A01G086400.1	Wheat	cytosol	33.76	40.15
TraesCS7A01G466200.1	Wheat	cytosol	37.58	40.14
TraesCS6A01G148100.1	Wheat	cytosol	34.39	40.0
TraesCS7A01G487500.1	Wheat	cytosol	35.03	39.57
TraesCS1A01G397400.1	Wheat	cytosol	38.85	39.35
TraesCS1A01G397500.1	Wheat	golgi, unclear	38.85	39.35
TraesCS1A01G105400.1	Wheat	cytosol	38.85	39.35
TraesCS2A01G458000.1	Wheat	cytosol	35.03	38.73
TraesCS2A01G458100.1	Wheat	cytosol	35.03	38.73
TraesCS3A01G503700.1	Wheat	cytosol, mitochondrion	37.58	38.06
TraesCS1A01G166000.1	Wheat	unclear	38.22	37.04
TraesCS5A01G292600.1	Wheat	cytosol	39.49	36.47
TraesCS4A01G077000.1	Wheat	cytosol	36.31	36.08
TraesCS2A01G458600.1	Wheat	cytosol	29.94	33.81
TraesCS5A01G196400.1	Wheat	cytosol	30.57	33.57
TraesCS2A01G458800.1	Wheat	cytosol	29.3	33.33
TraesCS1A01G227100.1	Wheat	cytosol	35.03	32.54
TraesCS3A01G040600.1	Wheat	cytosol	48.41	32.48
TraesCS7A01G453300.1	Wheat	cytosol	61.78	31.91
TraesCS7A01G027400.1	Wheat	cytosol	43.31	31.19
TraesCS5A01G196700.1	Wheat	cytosol	26.75	31.11
TraesCS6A01G136700.1	Wheat	cytosol	29.94	30.72
TraesCS6A01G112400.1	Wheat	cytosol	29.94	30.72
TraesCS7A01G453400.1	Wheat	cytosol	29.3	30.26
TraesCS6A01G266000.1	Wheat	cytosol	61.78	29.75
CDX79728	Canola	cytosol	42.04	29.07
TraesCS2A01G093300.1	Wheat	cytosol	24.84	26.53
TraesCS6A01G119700.2	Wheat	cytosol	36.31	24.89
TraesCS1A01G313500.3	Wheat	cytosol, plastid	45.22	11.97

Protein Annotations

EnsemblPlants:TraesCS3A01G504300.1	EnsemblPlantsGene:TraesCS3A01G504300	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF231
PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	SMART:SM00213	SUPFAM:SSF54236	MapMan:35.1

Description

No Description!

Coordinates

chr3A:+:726443939..726444412

Molecular Weight (calculated)

17607.5 Da

IEP (calculated)

6.092

GRAVY (calculated)

0.008

Length

157 amino acids

Sequence
(BLAST)

001: MQIFVTETLE GRTITLEVDS LDTIDNVKAK IEDIGGFPKV QQCLIFANKQ LEDEKLTLAD HNICKGSTLL LILLPCSPTF VMQVFVKMPQ GKVLTLQVGQ
101: SDTINSVNVK IYEKNGVPPR QQRIIFAGNQ LEDHRTLADY KIYSDSTLHL VFHLCGC

Best Arabidopsis Sequence Match ( AT4G05050.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.