Factsheet for TraesCS3B01G567100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	87.88	88.18
TraesCS3A01G504300.1	Wheat	cytosol	46.13	87.26
HORVU3Hr1G110900.1	Barley	cytosol	61.95	81.78
TraesCS3B01G567400.1	Wheat	cytosol	77.44	77.44
TraesCS3B01G568000.1	Wheat	cytosol	69.7	69.46
TraesCS3B01G567200.1	Wheat	mitochondrion	52.19	69.2
TraesCS3B01G567300.1	Wheat	mitochondrion	49.16	66.97
TraesCS3B01G572400.1	Wheat	cytosol, mitochondrion	33.67	65.79
TraesCS7B01G366400.1	Wheat	cytosol	16.84	64.94
TraesCS7B01G366700.1	Wheat	cytosol	33.33	64.71
TraesCS3B01G568900.1	Wheat	mitochondrion	29.63	62.86
TraesCS7B01G366600.1	Wheat	cytosol	33.0	62.82
TraesCS3B01G569000.1	Wheat	mitochondrion	46.8	62.05
KXG28223	Sorghum	mitochondrion	43.1	59.53
TraesCS3B01G569700.1	Wheat	cytosol	63.3	58.57
TraesCS3B01G567800.1	Wheat	mitochondrion	43.1	57.14
TraesCS5B01G222800.1	Wheat	cytosol	27.61	53.59
TraesCS7B01G413800.1	Wheat	cytosol	27.61	53.59
TraesCS6B01G176000.1	Wheat	cytosol	27.27	52.94
TraesCS6B01G115100.1	Wheat	cytosol	30.64	52.0
TraesCS7B01G366800.1	Wheat	cytosol	32.32	50.26
TraesCS6B01G293300.1	Wheat	plastid	46.8	45.57
TraesCS3B01G043200.1	Wheat	cytosol	21.21	44.37
TraesCS4B01G008400.1	Wheat	cytosol	19.19	44.19
TraesCS6B01G164600.1	Wheat	cytosol	33.33	43.23
TraesCS6B01G164700.2	Wheat	cytosol	33.0	42.79
TraesCS4B01G218100.1	Wheat	cytosol	18.52	41.67
TraesCS4B01G218000.1	Wheat	cytosol	18.52	41.67
TraesCS6B01G148000.2	Wheat	cytosol	33.33	41.6
TraesCS5B01G524500.1	Wheat	cytosol	13.8	41.0
TraesCS5B01G260700.1	Wheat	cytosol	18.52	40.74
TraesCS1B01G241200.1	Wheat	cytosol	18.86	40.29
TraesCS7B01G390900.1	Wheat	cytosol	18.86	40.29
TraesCS7B01G390800.1	Wheat	cytosol	18.86	40.29
TraesCS1B01G130900.1	Wheat	cytosol	20.88	40.0
TraesCS1B01G425700.1	Wheat	cytosol	20.88	40.0
TraesCS2B01G480400.1	Wheat	cytosol	18.86	39.44
TraesCS2B01G480300.1	Wheat	cytosol	18.86	39.44
TraesCS6B01G176400.1	Wheat	cytosol	17.85	39.26
TraesCS7B01G044300.1	Wheat	cytosol	8.08	38.1
TraesCS2B01G480500.1	Wheat	cytosol	17.51	37.68
TraesCS1B01G182700.1	Wheat	cytosol	20.54	37.65
TraesCS4B01G233100.1	Wheat	cytosol	19.19	37.01
TraesCS2B01G480600.1	Wheat	cytosol	17.17	36.96
TraesCS6B01G110300.1	Wheat	cytosol	33.0	36.3
TraesCS7B01G354200.1	Wheat	cytosol	33.33	35.36
TraesCS3B01G061600.1	Wheat	cytosol	28.96	34.68
TraesCS5B01G187200.1	Wheat	cytosol	16.5	34.51
TraesCS7B01G354100.1	Wheat	cytosol	33.33	32.46
TraesCS5B01G524600.1	Wheat	cytosol	14.81	32.12
TraesCS6B01G164900.1	Wheat	cytosol	16.5	32.03
TraesCS7B01G381800.1	Wheat	cytosol	16.5	32.03
TraesCS7B01G367700.1	Wheat	cytosol	16.5	32.03
TraesCS2B01G426500.1	Wheat	cytosol	16.5	32.03
TraesCS5B01G080200.1	Wheat	cytosol	16.5	32.03
TraesCS6B01G140600.1	Wheat	cytosol	16.5	32.03
TraesCS6B01G012500.1	Wheat	cytosol	26.26	31.84
TraesCS5B01G524700.1	Wheat	cytosol	14.81	31.65
CDX79728	Canola	cytosol	22.56	29.52
TraesCS7B01G354000.2	Wheat	cytosol	30.3	29.13
TraesCS7B01G004300.1	Wheat	cytosol	20.2	27.52
TraesCS2B01G107800.1	Wheat	cytosol	14.14	27.45
TraesCS2B01G107600.1	Wheat	cytosol	12.79	27.14
TraesCS7B01G367600.1	Wheat	cytosol	27.27	26.91
TraesCS4B01G387300.1	Wheat	cytosol	28.96	26.71
TraesCS7B01G486200.1	Wheat	cytosol	23.91	24.4
TraesCS4B01G389100.1	Wheat	endoplasmic reticulum	13.8	19.43
TraesCS1B01G325300.1	Wheat	cytosol	24.92	18.64
TraesCS5B01G386500.1	Wheat	nucleus	21.89	16.84
TraesCS5B01G387000.1	Wheat	cytosol	28.62	12.43
TraesCS5B01G386900.1	Wheat	cytosol	8.42	6.33

Protein Annotations

EnsemblPlants:TraesCS3B01G567100.1	EnsemblPlantsGene:TraesCS3B01G567100	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF238
PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	SEG:seg	SMART:SM00213	SUPFAM:SSF54236
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:798637544..798640484

Molecular Weight (calculated)

32784.9 Da

IEP (calculated)

4.842

GRAVY (calculated)

-0.423

Length

297 amino acids

Sequence
(BLAST)

001: MPPKKRLHQL PAAPKLEDHV EEAAPAVSTS GTEDSEEEEE ELFGSGSGGG DNEDDSGSHS SQIDGADMDD PSKVHIFVKN PAGRKICLRG VHLSDTLYTI
101: KAKIQEQYSL VFDGVQLEDS RTLADYGIKH DFTLDLQEKM QIFVTETLGG RTITLEVDSL DTIDKVKAKI EDIEGFPKLQ QCLIFDNKQL EDGTRTLAEH
201: NIGKGSTLLL ILLPCSPTSV MQVFVKTPPE GKVLTLKVGQ SDTINSVKVK IYEKNGAPPR QQRIIFAGNQ LEDHRTLADY KIYSECTLHL AFRLCGC

Best Arabidopsis Sequence Match ( AT4G02890.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.