Factsheet for TraesCS2B01G480500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G458600.1	Wheat	cytosol	94.2	93.53
TraesCS2D01G459100.1	Wheat	cytosol	93.48	93.48
TraesCS2B01G480600.1	Wheat	cytosol	82.61	82.61
TraesCS7B01G366400.1	Wheat	cytosol	43.48	77.92
TraesCS4B01G008400.1	Wheat	cytosol	67.39	72.09
TraesCS4B01G218100.1	Wheat	cytosol	68.84	71.97
TraesCS1B01G241200.1	Wheat	cytosol	71.01	70.5
TraesCS5B01G260700.1	Wheat	cytosol	68.84	70.37
TraesCS4B01G218000.1	Wheat	cytosol	66.67	69.7
TraesCS2B01G480300.1	Wheat	cytosol	71.01	69.01
TraesCS2B01G480400.1	Wheat	cytosol	71.01	69.01
TraesCS6B01G176400.1	Wheat	cytosol	67.39	68.89
TraesCS7B01G390900.1	Wheat	cytosol	68.12	67.63
TraesCS7B01G390800.1	Wheat	cytosol	68.12	67.63
TraesCS5B01G187200.1	Wheat	cytosol	68.12	66.2
TraesCS4B01G233100.1	Wheat	cytosol	67.39	60.39
TraesCS5B01G524500.1	Wheat	cytosol	41.3	57.0
TraesCS5B01G524600.1	Wheat	cytosol	52.9	53.28
TraesCS5B01G524700.1	Wheat	cytosol	53.62	53.24
TraesCS2B01G107800.1	Wheat	cytosol	56.52	50.98
TraesCS2B01G107600.1	Wheat	cytosol	51.45	50.71
TraesCS7B01G366700.1	Wheat	cytosol	51.45	46.41
TraesCS7B01G366600.1	Wheat	cytosol	51.45	45.51
TraesCS1B01G425700.1	Wheat	cytosol	50.72	45.16
TraesCS1B01G130900.1	Wheat	cytosol	50.72	45.16
TraesCS6B01G176000.1	Wheat	cytosol	50.0	45.1
TraesCS5B01G222800.1	Wheat	cytosol	49.28	44.44
TraesCS7B01G413800.1	Wheat	cytosol	49.28	44.44
TraesCS1B01G182700.1	Wheat	cytosol	50.72	43.21
TraesCS6B01G115100.1	Wheat	cytosol	48.55	38.29
TraesCS7B01G366800.1	Wheat	cytosol	52.17	37.7
TraesCS6B01G164700.2	Wheat	cytosol	55.8	33.62
TraesCS6B01G164600.1	Wheat	cytosol	55.8	33.62
TraesCS6B01G148000.2	Wheat	cytosol	55.8	32.35
TraesCS3B01G043200.1	Wheat	cytosol	31.16	30.28
TraesCS7B01G354200.1	Wheat	cytosol	55.8	27.5
TraesCS6B01G110300.1	Wheat	cytosol	53.62	27.41
TraesCS3B01G572400.1	Wheat	cytosol, mitochondrion	29.71	26.97
TraesCS7B01G354100.1	Wheat	cytosol	55.8	25.25
TraesCS7B01G354000.2	Wheat	cytosol	55.8	24.92
TraesCS6B01G012500.1	Wheat	cytosol	42.75	24.08
TraesCS6B01G293300.1	Wheat	plastid	51.45	23.28
TraesCS3B01G567200.1	Wheat	mitochondrion	36.23	22.32
TraesCS7B01G367600.1	Wheat	cytosol	47.1	21.59
TraesCS3B01G567300.1	Wheat	mitochondrion	33.33	21.1
TraesCS3B01G568900.1	Wheat	mitochondrion	21.01	20.71
TraesCS3B01G569000.1	Wheat	mitochondrion	32.61	20.09
TraesCS3B01G567800.1	Wheat	mitochondrion	32.61	20.09
TraesCS4B01G389100.1	Wheat	endoplasmic reticulum	29.71	19.43
TraesCS3B01G567400.1	Wheat	cytosol	39.13	18.18
TraesCS4B01G387300.1	Wheat	cytosol	42.03	18.01
TraesCS3B01G061600.1	Wheat	cytosol	31.88	17.74
TraesCS3B01G567100.1	Wheat	nucleus	37.68	17.51
TraesCS7B01G004300.1	Wheat	cytosol	26.09	16.51
TraesCS3B01G568000.1	Wheat	cytosol	35.51	16.44
TraesCS3B01G569700.1	Wheat	cytosol	37.68	16.2
TraesCS7B01G486200.1	Wheat	cytosol	33.33	15.81
TraesCS1B01G325300.1	Wheat	cytosol	36.23	12.59
TraesCS5B01G386500.1	Wheat	nucleus	31.88	11.4
TraesCS6B01G164900.1	Wheat	cytosol	11.59	10.46
TraesCS6B01G140600.1	Wheat	cytosol	11.59	10.46
TraesCS7B01G367700.1	Wheat	cytosol	11.59	10.46
TraesCS7B01G381800.1	Wheat	cytosol	11.59	10.46
TraesCS2B01G426500.1	Wheat	cytosol	11.59	10.46
TraesCS5B01G080200.1	Wheat	cytosol	11.59	10.46
TraesCS7B01G044300.1	Wheat	cytosol	4.35	9.52
TraesCS5B01G387000.1	Wheat	cytosol	31.88	6.43
TraesCS5B01G386900.1	Wheat	cytosol	0.72	0.25

Protein Annotations

MapMan:17.1.2.1.43	Gene3D:2.20.28.70	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR000626	InterPro:IPR038587	InterPro:L40e_sf	PFAM:PF00240	PFAM:PF01020
PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF255	InterPro:Ribosomal_L40e
InterPro:Ribosomal_zn-bd	SMART:SM00213	SMART:SM01377	SUPFAM:SSF54236	SUPFAM:SSF57829	EnsemblPlantsGene:TraesCS2B01G480500
EnsemblPlants:TraesCS2B01G480500.1	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	:

Description

No Description!

Coordinates

chr2B:+:677953688..677956013

Molecular Weight (calculated)

15689.3 Da

IEP (calculated)

10.468

GRAVY (calculated)

-0.632

Length

138 amino acids

Sequence
(BLAST)

001: MQIFVKSLTG GTMTLEVESC TAVDSVKAKI HDKEGIQPDQ QRLIFAGKQL DDGRTLADYS IHKESTLHLA LRLVGGGKGG YYPTRMEPNL RMLALKYRQH
101: RLVCRKCYAR LPLRSANCRK KKCGHSNDIR PKEKLRPH

Best Arabidopsis Sequence Match ( AT2G36170.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGIIEP SLMMLARKYN QDKMICRKCY
101: ARLHPRAVNC RKKKCGHSNQ LRPKKKIK

Arabidopsis Description

RPL40BUbiquitin-60S ribosomal protein L40-1 [Source:UniProtKB/Swiss-Prot;Acc:B9DHA6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.