Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4A01G086400.1 | Wheat | cytosol | 100.0 | 100.0 |
TraesCS4D01G218300.1 | Wheat | cytosol | 90.15 | 96.75 |
TraesCS7B01G366400.1 | Wheat | cytosol | 54.55 | 93.51 |
TraesCS4B01G218100.1 | Wheat | cytosol | 86.36 | 86.36 |
TraesCS4B01G008400.1 | Wheat | cytosol | 83.33 | 85.27 |
GSMUA_Achr11P... | Banana | cytosol | 51.52 | 83.95 |
TraesCS5B01G260700.1 | Wheat | cytosol | 77.27 | 75.56 |
TraesCS1B01G241200.1 | Wheat | cytosol | 79.55 | 75.54 |
TraesCS2B01G480300.1 | Wheat | cytosol | 81.06 | 75.35 |
TraesCS2B01G480400.1 | Wheat | cytosol | 81.06 | 75.35 |
TraesCS7B01G390900.1 | Wheat | cytosol | 78.03 | 74.1 |
TraesCS7B01G390800.1 | Wheat | cytosol | 78.03 | 74.1 |
TraesCS6B01G176400.1 | Wheat | cytosol | 75.76 | 74.07 |
TraesCS4B01G233100.1 | Wheat | cytosol | 83.33 | 71.43 |
TraesCS2B01G480500.1 | Wheat | cytosol | 69.7 | 66.67 |
TraesCS2B01G480600.1 | Wheat | cytosol | 69.7 | 66.67 |
HORVU4Hr1G061900.2 | Barley | nucleus, plastid | 92.42 | 63.87 |
TraesCS5B01G187200.1 | Wheat | cytosol | 68.18 | 63.38 |
TraesCS5B01G524500.1 | Wheat | cytosol | 46.97 | 62.0 |
TraesCS5B01G524600.1 | Wheat | cytosol | 63.64 | 61.31 |
TraesCS5B01G524700.1 | Wheat | cytosol | 61.36 | 58.27 |
TraesCS2B01G107800.1 | Wheat | cytosol | 66.67 | 57.52 |
TraesCS2B01G107600.1 | Wheat | cytosol | 57.58 | 54.29 |
TraesCS7B01G366700.1 | Wheat | cytosol | 62.12 | 53.59 |
TraesCS1B01G425700.1 | Wheat | cytosol | 62.88 | 53.55 |
TraesCS1B01G130900.1 | Wheat | cytosol | 62.88 | 53.55 |
TraesCS7B01G366600.1 | Wheat | cytosol | 62.12 | 52.56 |
TraesCS7B01G413800.1 | Wheat | cytosol | 59.85 | 51.63 |
TraesCS5B01G222800.1 | Wheat | cytosol | 59.85 | 51.63 |
TraesCS1B01G182700.1 | Wheat | cytosol | 62.88 | 51.23 |
TraesCS6B01G176000.1 | Wheat | cytosol | 59.09 | 50.98 |
TraesCS6B01G115100.1 | Wheat | cytosol | 61.36 | 46.29 |
TraesCS7B01G366800.1 | Wheat | cytosol | 63.64 | 43.98 |
TraesCS6B01G164700.2 | Wheat | cytosol | 65.91 | 37.99 |
TraesCS6B01G164600.1 | Wheat | cytosol | 65.91 | 37.99 |
TraesCS6B01G148000.2 | Wheat | cytosol | 65.91 | 36.55 |
TraesCS3B01G043200.1 | Wheat | cytosol | 34.85 | 32.39 |
TraesCS3B01G572400.1 | Wheat | cytosol, mitochondrion | 36.36 | 31.58 |
TraesCS7B01G354200.1 | Wheat | cytosol | 65.91 | 31.07 |
TraesCS6B01G110300.1 | Wheat | cytosol | 62.12 | 30.37 |
TraesCS7B01G354100.1 | Wheat | cytosol | 65.91 | 28.52 |
TraesCS7B01G354000.2 | Wheat | cytosol | 65.91 | 28.16 |
TraesCS6B01G012500.1 | Wheat | cytosol | 50.76 | 27.35 |
TraesCS6B01G293300.1 | Wheat | plastid | 62.12 | 26.89 |
TraesCS3B01G567200.1 | Wheat | mitochondrion | 43.94 | 25.89 |
TraesCS3B01G567300.1 | Wheat | mitochondrion | 41.67 | 25.23 |
TraesCS7B01G367600.1 | Wheat | cytosol | 56.82 | 24.92 |
TraesCS3B01G567800.1 | Wheat | mitochondrion | 40.15 | 23.66 |
TraesCS3B01G568900.1 | Wheat | mitochondrion | 25.0 | 23.57 |
TraesCS3B01G569000.1 | Wheat | mitochondrion | 38.64 | 22.77 |
TraesCS4B01G389100.1 | Wheat | endoplasmic reticulum | 35.61 | 22.27 |
TraesCS4B01G387300.1 | Wheat | cytosol | 47.73 | 19.57 |
TraesCS3B01G567400.1 | Wheat | cytosol | 43.94 | 19.53 |
TraesCS3B01G568000.1 | Wheat | cytosol | 42.42 | 18.79 |
TraesCS3B01G569700.1 | Wheat | cytosol | 45.45 | 18.69 |
TraesCS3B01G567100.1 | Wheat | nucleus | 41.67 | 18.52 |
TraesCS3B01G061600.1 | Wheat | cytosol | 33.33 | 17.74 |
TraesCS7B01G004300.1 | Wheat | cytosol | 26.52 | 16.05 |
TraesCS7B01G486200.1 | Wheat | cytosol | 33.33 | 15.12 |
TraesCS1B01G325300.1 | Wheat | cytosol | 40.91 | 13.6 |
TraesCS5B01G386500.1 | Wheat | nucleus | 34.85 | 11.92 |
TraesCS7B01G044300.1 | Wheat | cytosol | 4.55 | 9.52 |
TraesCS6B01G164900.1 | Wheat | cytosol | 10.61 | 9.15 |
TraesCS5B01G080200.1 | Wheat | cytosol | 10.61 | 9.15 |
TraesCS7B01G367700.1 | Wheat | cytosol | 10.61 | 9.15 |
TraesCS7B01G381800.1 | Wheat | cytosol | 10.61 | 9.15 |
TraesCS2B01G426500.1 | Wheat | cytosol | 10.61 | 9.15 |
TraesCS6B01G140600.1 | Wheat | cytosol | 10.61 | 9.15 |
TraesCS5B01G387000.1 | Wheat | cytosol | 34.85 | 6.73 |
TraesCS5B01G386900.1 | Wheat | cytosol | 1.52 | 0.51 |
Protein Annotations
MapMan:17.1.2.1.43 | Gene3D:2.20.28.70 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
GO:GO:0019538 | InterPro:IPR000626 | InterPro:IPR038587 | InterPro:L40e_sf | PFAM:PF00240 | PFAM:PF01020 |
PRINTS:PR00348 | ScanProsite:PS00299 | PFscan:PS50053 | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF255 | InterPro:Ribosomal_L40e |
InterPro:Ribosomal_zn-bd | SMART:SM00213 | SMART:SM01377 | SUPFAM:SSF54236 | SUPFAM:SSF57829 | EnsemblPlantsGene:TraesCS4B01G218000 |
EnsemblPlants:TraesCS4B01G218000.1 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS | InterPro:Ubiquitin_dom | TIGR:cd01803 |
Description
No Description!
Coordinates
chr4B:-:459945396..459947247
Molecular Weight (calculated)
14939.4 Da
IEP (calculated)
10.396
GRAVY (calculated)
-0.645
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIFVKTLTG KTITLEVESS DTIDAVKAKI QDKEGIPPDQ QRLIFAGKQL DDGRTLADYN IQKESTIHLV LRLRGGGCMI EPNLKALAQK YNQGKLICRK
101: CYSRLPPKAK SCRKKKCGHS NQLRSKKKCR YC
101: CYSRLPPKAK SCRKKKCGHS NQLRSKKKCR YC
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYAIEGG SVLHLVLALR GGLL
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYAIEGG SVLHLVLALR GGLL
Arabidopsis Description
RUB2UBQ7 [Source:UniProtKB/TrEMBL;Acc:A0A178VL95]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.