Factsheet for TraesCS3B01G567300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G567200.1	Wheat	mitochondrion	89.91	87.5
TraesCS3A01G504400.1	Wheat	cytosol	86.24	83.93
HORVU3Hr1G111000.1	Barley	cytosol	48.17	68.63
TraesCS3B01G572400.1	Wheat	cytosol, mitochondrion	47.71	68.42
TraesCS7B01G366700.1	Wheat	cytosol	45.41	64.71
TraesCS7B01G366600.1	Wheat	cytosol	45.87	64.1
TraesCS7B01G366400.1	Wheat	cytosol	22.48	63.64
TraesCS3B01G569000.1	Wheat	mitochondrion	59.17	57.59
TraesCS3D01G510200.1	Wheat	cytosol	58.26	56.44
TraesCS3B01G568900.1	Wheat	mitochondrion	36.24	56.43
OQU83265	Sorghum	cytosol	56.88	56.11
TraesCS3B01G568000.1	Wheat	cytosol	76.15	55.7
TraesCS3B01G567800.1	Wheat	mitochondrion	56.88	55.36
TraesCS5B01G222800.1	Wheat	cytosol	38.53	54.9
TraesCS7B01G413800.1	Wheat	cytosol	38.53	54.9
TraesCS6B01G176000.1	Wheat	cytosol	38.07	54.25
TraesCS6B01G115100.1	Wheat	cytosol	43.12	53.71
TraesCS3B01G569700.1	Wheat	cytosol	77.98	52.96
TraesCS7B01G366800.1	Wheat	cytosol	45.87	52.36
TraesCS3B01G567100.1	Wheat	nucleus	66.97	49.16
TraesCS3B01G567400.1	Wheat	cytosol	66.97	49.16
TraesCS6B01G293300.1	Wheat	plastid	64.22	45.9
TraesCS3B01G043200.1	Wheat	cytosol	28.9	44.37
TraesCS6B01G164600.1	Wheat	cytosol	45.87	43.67
TraesCS4B01G008400.1	Wheat	cytosol	25.69	43.41
TraesCS5B01G524500.1	Wheat	cytosol	19.72	43.0
TraesCS6B01G164700.2	Wheat	cytosol	44.95	42.79
TraesCS4B01G218100.1	Wheat	cytosol	25.69	42.42
TraesCS6B01G148000.2	Wheat	cytosol	45.87	42.02
TraesCS4B01G218000.1	Wheat	cytosol	25.23	41.67
TraesCS7B01G044300.1	Wheat	cytosol	11.93	41.27
TraesCS7B01G390900.1	Wheat	cytosol	25.23	39.57
TraesCS7B01G390800.1	Wheat	cytosol	25.23	39.57
TraesCS2B01G480300.1	Wheat	cytosol	25.23	38.73
TraesCS2B01G480400.1	Wheat	cytosol	25.23	38.73
TraesCS5B01G260700.1	Wheat	cytosol	23.85	38.52
TraesCS1B01G241200.1	Wheat	cytosol	24.31	38.13
TraesCS6B01G176400.1	Wheat	cytosol	23.39	37.78
TraesCS1B01G130900.1	Wheat	cytosol	26.61	37.42
TraesCS1B01G425700.1	Wheat	cytosol	26.61	37.42
TraesCS6B01G110300.1	Wheat	cytosol	45.41	36.67
TraesCS4B01G233100.1	Wheat	cytosol	25.69	36.36
TraesCS1B01G182700.1	Wheat	cytosol	26.61	35.8
TraesCS7B01G354200.1	Wheat	cytosol	45.87	35.71
TraesCS3B01G061600.1	Wheat	cytosol	39.45	34.68
TraesCS5B01G187200.1	Wheat	cytosol	22.48	34.51
TraesCS2B01G480500.1	Wheat	cytosol	21.1	33.33
TraesCS7B01G354100.1	Wheat	cytosol	45.87	32.79
TraesCS6B01G140600.1	Wheat	cytosol	22.94	32.68
TraesCS7B01G381800.1	Wheat	cytosol	22.94	32.68
TraesCS7B01G367700.1	Wheat	cytosol	22.94	32.68
TraesCS2B01G426500.1	Wheat	cytosol	22.94	32.68
TraesCS5B01G080200.1	Wheat	cytosol	22.94	32.68
TraesCS6B01G164900.1	Wheat	cytosol	22.94	32.68
TraesCS2B01G480600.1	Wheat	cytosol	20.64	32.61
TraesCS5B01G524600.1	Wheat	cytosol	19.72	31.39
TraesCS5B01G524700.1	Wheat	cytosol	19.72	30.94
TraesCS6B01G012500.1	Wheat	cytosol	34.4	30.61
TraesCS7B01G354000.2	Wheat	cytosol	39.45	27.83
CDX79728	Canola	cytosol	28.9	27.75
TraesCS7B01G367600.1	Wheat	cytosol	37.61	27.24
TraesCS2B01G107600.1	Wheat	cytosol	17.43	27.14
TraesCS2B01G107800.1	Wheat	cytosol	18.81	26.8
TraesCS7B01G004300.1	Wheat	cytosol	25.69	25.69
TraesCS4B01G387300.1	Wheat	cytosol	36.7	24.84
TraesCS7B01G486200.1	Wheat	cytosol	31.19	23.37
TraesCS4B01G389100.1	Wheat	endoplasmic reticulum	22.02	22.75
TraesCS1B01G325300.1	Wheat	cytosol	31.65	17.38
TraesCS5B01G386500.1	Wheat	nucleus	29.82	16.84
TraesCS5B01G387000.1	Wheat	cytosol	34.86	11.11
TraesCS5B01G386900.1	Wheat	cytosol	7.8	4.3

Protein Annotations

EnsemblPlants:TraesCS3B01G567300.1	EnsemblPlantsGene:TraesCS3B01G567300	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF238
PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	SMART:SM00213	SUPFAM:SSF54236	MapMan:35.1

Description

No Description!

Coordinates

chr3B:+:798686704..798687360

Molecular Weight (calculated)

24920.1 Da

IEP (calculated)

7.422

GRAVY (calculated)

-0.355

Length

218 amino acids

Sequence
(BLAST)

001: MRVFVKTPTG RTICLKVHSS DTLYTVKAKI QQQYRLFFDG VQLEDNRTLA DYGIQHDSTI DLQEKMQIYV TEMRAGRTIA LEVDSLDTIG NVKSRIQEME
101: GFPKGQQCLI FANKQLEDDN RSLADHNIWK ESTLLLVLRP CRLGESRIMH IFVKPLKGKT LTLEVESSYT IDNVKVKIYE QEGTCPSQQR LIFAGKQLAD
201: GCTLADYNIR SENTVHLC

Best Arabidopsis Sequence Match ( AT4G02890.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.