Factsheet for TraesCS3B01G061600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G366400.1	Wheat	cytosol	15.32	49.35
TraesCS7B01G366700.1	Wheat	cytosol	29.03	47.06
TraesCS7B01G366600.1	Wheat	cytosol	29.03	46.15
TraesCS6B01G176000.1	Wheat	cytosol	25.0	40.52
TraesCS3B01G572400.1	Wheat	cytosol, mitochondrion	24.6	40.13
TraesCS7B01G413800.1	Wheat	cytosol	24.6	39.87
TraesCS5B01G222800.1	Wheat	cytosol	24.6	39.87
TraesCS3B01G567300.1	Wheat	mitochondrion	34.68	39.45
TraesCS6B01G115100.1	Wheat	cytosol	27.82	39.43
TraesCS3B01G567200.1	Wheat	mitochondrion	34.27	37.95
TraesCS7B01G366800.1	Wheat	cytosol	28.23	36.65
TraesCS4B01G008400.1	Wheat	cytosol	18.55	35.66
TraesCS4B01G218100.1	Wheat	cytosol	18.95	35.61
TraesCS6B01G176400.1	Wheat	cytosol	19.35	35.56
TraesCS6B01G293300.1	Wheat	plastid	42.74	34.75
TraesCS3B01G569000.1	Wheat	mitochondrion	31.05	34.38
TraesCS7B01G390900.1	Wheat	cytosol	18.95	33.81
TraesCS7B01G390800.1	Wheat	cytosol	18.95	33.81
TraesCS4B01G218000.1	Wheat	cytosol	17.74	33.33
TraesCS5B01G260700.1	Wheat	cytosol	18.15	33.33
TraesCS6B01G164600.1	Wheat	cytosol	30.24	32.75
TraesCS3B01G567800.1	Wheat	mitochondrion	29.44	32.59
TraesCS2B01G480400.1	Wheat	cytosol	18.55	32.39
TraesCS2B01G480300.1	Wheat	cytosol	18.55	32.39
TraesCS1B01G241200.1	Wheat	cytosol	18.15	32.37
TraesCS5B01G524500.1	Wheat	cytosol	12.9	32.0
TraesCS2B01G480500.1	Wheat	cytosol	17.74	31.88
TraesCS6B01G164700.2	Wheat	cytosol	29.44	31.88
TraesCS6B01G148000.2	Wheat	cytosol	30.24	31.51
TraesCS3B01G568900.1	Wheat	mitochondrion	17.74	31.43
TraesCS1B01G130900.1	Wheat	cytosol	18.95	30.32
TraesCS1B01G425700.1	Wheat	cytosol	18.95	30.32
TraesCS4B01G233100.1	Wheat	cytosol	18.55	29.87
TraesCS3B01G043200.1	Wheat	cytosol	16.94	29.58
TraesCS2B01G480600.1	Wheat	cytosol	16.13	28.99
TraesCS3B01G567100.1	Wheat	nucleus	34.68	28.96
TraesCS2B01G107800.1	Wheat	cytosol	17.74	28.76
TraesCS2B01G107600.1	Wheat	cytosol	16.13	28.57
TraesCS5B01G524600.1	Wheat	cytosol	15.73	28.47
TraesCS1B01G182700.1	Wheat	cytosol	18.55	28.4
TraesCS3B01G567400.1	Wheat	cytosol	33.87	28.28
TraesCS5B01G187200.1	Wheat	cytosol	15.73	27.46
TraesCS3B01G569700.1	Wheat	cytosol	34.68	26.79
TraesCS7B01G354200.1	Wheat	cytosol	30.24	26.79
TraesCS6B01G110300.1	Wheat	cytosol	29.03	26.67
TraesCS5B01G524700.1	Wheat	cytosol	14.92	26.62
TraesCS7B01G044300.1	Wheat	cytosol	6.45	25.4
TraesCS3B01G568000.1	Wheat	cytosol	30.24	25.17
TraesCS7B01G354100.1	Wheat	cytosol	30.24	24.59
TraesCS6B01G012500.1	Wheat	cytosol	24.19	24.49
TraesCS7B01G367700.1	Wheat	cytosol	14.92	24.18
TraesCS2B01G426500.1	Wheat	cytosol	14.92	24.18
TraesCS6B01G164900.1	Wheat	cytosol	14.92	24.18
TraesCS7B01G381800.1	Wheat	cytosol	14.92	24.18
TraesCS5B01G080200.1	Wheat	cytosol	14.92	24.18
TraesCS6B01G140600.1	Wheat	cytosol	14.92	24.18
TraesCS7B01G004300.1	Wheat	cytosol	20.16	22.94
TraesCS7B01G367600.1	Wheat	cytosol	27.82	22.92
TraesCS7B01G354000.2	Wheat	cytosol	26.61	21.36
TraesCS4B01G387300.1	Wheat	cytosol	24.6	18.94
TraesCS7B01G486200.1	Wheat	cytosol	20.97	17.87
TraesCS4B01G389100.1	Wheat	endoplasmic reticulum	14.52	17.06
PGSC0003DMT400033485	Potato	cytosol	12.1	14.49
TraesCS1B01G325300.1	Wheat	cytosol	22.98	14.36
Solyc03g005610.2.1	Tomato	cytosol	22.58	13.93
TraesCS5B01G386500.1	Wheat	nucleus	18.55	11.92
TraesCS5B01G387000.1	Wheat	cytosol	26.21	9.5
TraesCS5B01G386900.1	Wheat	cytosol	8.06	5.06
GSMUA_Achr9P30160_001	Banana	cytosol	1.21	3.9

Protein Annotations

EnsemblPlants:TraesCS3B01G061600.1	EnsemblPlantsGene:TraesCS3B01G061600	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF242
PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	SMART:SM00213	SUPFAM:SSF54236	MapMan:35.1

Description

No Description!

Coordinates

chr3B:+:33485378..33486124

Molecular Weight (calculated)

27353.1 Da

IEP (calculated)

6.362

GRAVY (calculated)

-0.273

Length

248 amino acids

Sequence
(BLAST)

001: MQLFVRTLAG EAIPVNADPS DTIYNVKTRI HSESGDPMSN HRLMFDGKEL EEGRTIADYG IDKESVVQLA LLPKPTRGPM QIFLRMPNGR LTLEVESSDT
101: VDKVKKRIHV TWGIPPPSQL ALLLDGRQLE DGHGLDGYGV CEGSTLHLAL RGSGWILISV RLPNARKNPI IPLMVQSSDT VDIFSEKLQE LKGITASEQR
201: IIFRGSQLKD GRTLAECGVV ENSCLDVLLR LRGTNCPGCA RQRGEEVD

Best Arabidopsis Sequence Match ( AT4G02890.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.