Factsheet for TraesCS4B01G387300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G486200.1	Wheat	cytosol	79.19	87.63
TraesCS7B01G366400.1	Wheat	cytosol	17.7	74.03
TraesCS7B01G366700.1	Wheat	cytosol	31.68	66.67
TraesCS7B01G366600.1	Wheat	cytosol	31.99	66.03
TraesCS7B01G413800.1	Wheat	cytosol	28.26	59.48
TraesCS5B01G222800.1	Wheat	cytosol	28.26	59.48
TraesCS6B01G012500.1	Wheat	cytosol	45.03	59.18
TraesCS6B01G176000.1	Wheat	cytosol	27.95	58.82
TraesCS6B01G115100.1	Wheat	cytosol	30.12	55.43
TraesCS7B01G366800.1	Wheat	cytosol	31.37	52.88
TraesCS4B01G008400.1	Wheat	cytosol	19.57	48.84
TraesCS4B01G218000.1	Wheat	cytosol	19.57	47.73
TraesCS4B01G218100.1	Wheat	cytosol	19.25	46.97
TraesCS7B01G390900.1	Wheat	cytosol	19.88	46.04
TraesCS7B01G390800.1	Wheat	cytosol	19.88	46.04
TraesCS1B01G241200.1	Wheat	cytosol	19.88	46.04
TraesCS5B01G260700.1	Wheat	cytosol	19.25	45.93
TraesCS6B01G164600.1	Wheat	cytosol	32.61	45.85
TraesCS2B01G480300.1	Wheat	cytosol	20.19	45.77
TraesCS2B01G480400.1	Wheat	cytosol	20.19	45.77
TraesCS6B01G176400.1	Wheat	cytosol	18.94	45.19
TraesCS5B01G524500.1	Wheat	cytosol	13.98	45.0
TraesCS6B01G164700.2	Wheat	cytosol	31.99	44.98
TraesCS6B01G148000.2	Wheat	cytosol	32.61	44.12
TraesCS1B01G130900.1	Wheat	cytosol	20.81	43.23
TraesCS1B01G425700.1	Wheat	cytosol	20.81	43.23
TraesCS2B01G480600.1	Wheat	cytosol	18.32	42.75
TraesCS3B01G043200.1	Wheat	cytosol	18.63	42.25
TraesCS2B01G480500.1	Wheat	cytosol	18.01	42.03
TraesCS1B01G182700.1	Wheat	cytosol	20.81	41.36
TraesCS4B01G233100.1	Wheat	cytosol	19.57	40.91
TraesCS5B01G187200.1	Wheat	cytosol	18.01	40.85
TraesCS6B01G110300.1	Wheat	cytosol	32.61	38.89
TraesCS7B01G354200.1	Wheat	cytosol	32.61	37.5
TraesCS3B01G567300.1	Wheat	mitochondrion	24.84	36.7
TraesCS5B01G524600.1	Wheat	cytosol	15.22	35.77
TraesCS3B01G567200.1	Wheat	mitochondrion	24.84	35.71
TraesCS7B01G354100.1	Wheat	cytosol	32.61	34.43
TraesCS6B01G293300.1	Wheat	plastid	32.61	34.43
TraesCS7B01G044300.1	Wheat	cytosol	6.52	33.33
TraesCS5B01G524700.1	Wheat	cytosol	14.29	33.09
CDX79728	Canola	cytosol	22.98	32.6
TraesCS3B01G569000.1	Wheat	mitochondrion	22.36	32.14
TraesCS2B01G107600.1	Wheat	cytosol	13.66	31.43
TraesCS2B01G426500.1	Wheat	cytosol	14.91	31.37
TraesCS5B01G080200.1	Wheat	cytosol	14.91	31.37
TraesCS7B01G367700.1	Wheat	cytosol	14.91	31.37
TraesCS7B01G381800.1	Wheat	cytosol	14.91	31.37
TraesCS6B01G140600.1	Wheat	cytosol	14.91	31.37
TraesCS6B01G164900.1	Wheat	cytosol	14.91	31.37
TraesCS3B01G567800.1	Wheat	mitochondrion	21.74	31.25
TraesCS7B01G354000.2	Wheat	cytosol	28.88	30.1
TraesCS2B01G107800.1	Wheat	cytosol	14.29	30.07
TraesCS3B01G568000.1	Wheat	cytosol	27.33	29.53
TraesCS3B01G567100.1	Wheat	nucleus	26.71	28.96
TraesCS3B01G572400.1	Wheat	cytosol, mitochondrion	13.35	28.29
TraesCS7B01G367600.1	Wheat	cytosol	26.4	28.24
TraesCS7B01G004300.1	Wheat	cytosol	18.63	27.52
TraesCS3B01G567400.1	Wheat	cytosol	24.84	26.94
TraesCS3B01G569700.1	Wheat	cytosol	26.71	26.79
TraesCS3B01G061600.1	Wheat	cytosol	18.94	24.6
TraesCS3B01G568900.1	Wheat	mitochondrion	10.25	23.57
TraesCS4B01G389100.1	Wheat	endoplasmic reticulum	14.6	22.27
TraesCS1B01G325300.1	Wheat	cytosol	24.84	20.15
TraesCS5B01G386500.1	Wheat	nucleus	20.81	17.36
TraesCS5B01G387000.1	Wheat	cytosol	19.88	9.36
TraesCS5B01G386900.1	Wheat	cytosol	1.86	1.52

Protein Annotations

EnsemblPlants:TraesCS4B01G387300.1	EnsemblPlantsGene:TraesCS4B01G387300	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	PANTHER:PTHR10666
PANTHER:PTHR10666:SF240	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ScanProsite:PS00299	SMART:SM00213
SUPFAM:SSF54236	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:665322949..665324795

Molecular Weight (calculated)

36538.4 Da

IEP (calculated)

7.582

GRAVY (calculated)

-0.313

Length

322 amino acids

Sequence
(BLAST)

001: MAQCPAPAPT PGKMQIFVKT LTGGTITIDA KSSDTINKVK NKIHDKEGIP PDQQRLIFCG EQLEDGCTLA ENDIQKESTL LLVLRGELEI SVETLSGKVI
101: TLPAEPSDTI RAVKEKIQVQ HHLIFKGKQM VDSYTLANYG IMDMSRSSFE FHFHLQERMK IYINALDNPL YVKSSDTIDN IKMKINDEYG IHPGQQRLMF
201: KRMATILRVD LHSTLQGSHT LAYYNIQNGA TLDLVVCLRP RQMQIFVKNL IWKSLTLEVE SSDTIHSVKE KIEQVERIDP ARQRLIYCGW QLDDGLTLAD
301: YKIEALSTLR LGLRSKCPGR HE

Best Arabidopsis Sequence Match ( AT4G02890.3 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.