Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G174700.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS1A01G166000.1 | Wheat | unclear | 100.0 | 100.0 |
| TraesCS7B01G366400.1 | Wheat | cytosol | 46.3 | 97.4 |
| TraesCS1B01G130900.1 | Wheat | cytosol | 82.72 | 86.45 |
| TraesCS1B01G425700.1 | Wheat | cytosol | 82.1 | 85.81 |
| TraesCS4B01G008400.1 | Wheat | cytosol | 52.47 | 65.89 |
| TraesCS4B01G218100.1 | Wheat | cytosol | 51.23 | 62.88 |
| TraesCS4B01G218000.1 | Wheat | cytosol | 51.23 | 62.88 |
| TraesCS2B01G480300.1 | Wheat | cytosol | 52.47 | 59.86 |
| TraesCS2B01G480400.1 | Wheat | cytosol | 52.47 | 59.86 |
| TraesCS7B01G390800.1 | Wheat | cytosol | 51.23 | 59.71 |
| TraesCS1B01G241200.1 | Wheat | cytosol | 51.23 | 59.71 |
| TraesCS7B01G390900.1 | Wheat | cytosol | 51.23 | 59.71 |
| TraesCS5B01G260700.1 | Wheat | cytosol | 49.38 | 59.26 |
| Zm00001d032616_P001 | Maize | plastid | 56.17 | 58.33 |
| TraesCS6B01G176400.1 | Wheat | cytosol | 48.15 | 57.78 |
| KXG38267 | Sorghum | cytosol | 56.79 | 57.5 |
| TraesCS7B01G366700.1 | Wheat | cytosol | 53.7 | 56.86 |
| TraesCS7B01G366600.1 | Wheat | cytosol | 53.7 | 55.77 |
| TraesCS5B01G222800.1 | Wheat | cytosol | 52.47 | 55.56 |
| TraesCS7B01G413800.1 | Wheat | cytosol | 52.47 | 55.56 |
| TraesCS4B01G233100.1 | Wheat | cytosol | 52.47 | 55.19 |
| TraesCS6B01G176000.1 | Wheat | cytosol | 51.85 | 54.9 |
| TraesCS5B01G524500.1 | Wheat | cytosol | 33.33 | 54.0 |
| TraesCS2B01G480600.1 | Wheat | cytosol | 45.68 | 53.62 |
| Os10t0491801-00 | Rice | cytosol | 47.53 | 52.38 |
| TraesCS2B01G480500.1 | Wheat | cytosol | 43.21 | 50.72 |
| TraesCS6B01G115100.1 | Wheat | cytosol | 54.32 | 50.29 |
| TraesCS5B01G187200.1 | Wheat | cytosol | 43.21 | 49.3 |
| TraesCS7B01G366800.1 | Wheat | cytosol | 55.56 | 47.12 |
| TraesCS5B01G524600.1 | Wheat | cytosol | 38.27 | 45.26 |
| TraesCS5B01G524700.1 | Wheat | cytosol | 37.65 | 43.88 |
| TraesCS6B01G164600.1 | Wheat | cytosol | 58.02 | 41.05 |
| TraesCS6B01G164700.2 | Wheat | cytosol | 57.41 | 40.61 |
| TraesCS6B01G148000.2 | Wheat | cytosol | 58.02 | 39.5 |
| TraesCS2B01G107800.1 | Wheat | cytosol | 37.04 | 39.22 |
| TraesCS2B01G107600.1 | Wheat | cytosol | 33.33 | 38.57 |
| HORVU1Hr1G043930.8 | Barley | plastid | 99.38 | 38.24 |
| TraesCS3B01G043200.1 | Wheat | cytosol | 29.63 | 33.8 |
| TraesCS7B01G354200.1 | Wheat | cytosol | 58.02 | 33.57 |
| TraesCS3B01G572400.1 | Wheat | cytosol, mitochondrion | 31.48 | 33.55 |
| TraesCS6B01G110300.1 | Wheat | cytosol | 54.94 | 32.96 |
| TraesCS7B01G354100.1 | Wheat | cytosol | 58.02 | 30.82 |
| TraesCS7B01G354000.2 | Wheat | cytosol | 57.41 | 30.1 |
| TraesCS3B01G567200.1 | Wheat | mitochondrion | 39.51 | 28.57 |
| TraesCS6B01G293300.1 | Wheat | plastid | 53.7 | 28.52 |
| TraesCS7B01G367600.1 | Wheat | cytosol | 51.23 | 27.57 |
| TraesCS6B01G012500.1 | Wheat | cytosol | 41.36 | 27.35 |
| TraesCS3B01G567300.1 | Wheat | mitochondrion | 35.8 | 26.61 |
| TraesCS3B01G567800.1 | Wheat | mitochondrion | 34.57 | 25.0 |
| TraesCS3B01G568900.1 | Wheat | mitochondrion | 21.6 | 25.0 |
| TraesCS3B01G569000.1 | Wheat | mitochondrion | 32.72 | 23.66 |
| TraesCS3B01G567400.1 | Wheat | cytosol | 38.27 | 20.88 |
| TraesCS4B01G389100.1 | Wheat | endoplasmic reticulum | 27.16 | 20.85 |
| TraesCS4B01G387300.1 | Wheat | cytosol | 41.36 | 20.81 |
| TraesCS3B01G567100.1 | Wheat | nucleus | 37.65 | 20.54 |
| TraesCS7B01G004300.1 | Wheat | cytosol | 27.16 | 20.18 |
| TraesCS3B01G568000.1 | Wheat | cytosol | 36.42 | 19.8 |
| TraesCS3B01G569700.1 | Wheat | cytosol | 38.89 | 19.63 |
| TraesCS3B01G061600.1 | Wheat | cytosol | 28.4 | 18.55 |
| TraesCS7B01G486200.1 | Wheat | cytosol | 29.63 | 16.49 |
| TraesCS1B01G325300.1 | Wheat | cytosol | 37.65 | 15.37 |
| TraesCS5B01G386500.1 | Wheat | nucleus | 31.48 | 13.21 |
| TraesCS5B01G080200.1 | Wheat | cytosol | 11.11 | 11.76 |
| TraesCS6B01G140600.1 | Wheat | cytosol | 11.11 | 11.76 |
| TraesCS7B01G367700.1 | Wheat | cytosol | 11.11 | 11.76 |
| TraesCS7B01G381800.1 | Wheat | cytosol | 11.11 | 11.76 |
| TraesCS6B01G164900.1 | Wheat | cytosol | 11.11 | 11.76 |
| TraesCS2B01G426500.1 | Wheat | cytosol | 10.49 | 11.11 |
| TraesCS7B01G044300.1 | Wheat | cytosol | 3.7 | 9.52 |
| TraesCS5B01G387000.1 | Wheat | cytosol | 32.1 | 7.6 |
| TraesCS5B01G386900.1 | Wheat | cytosol | 1.85 | 0.76 |
Protein Annotations
| MapMan:17.1.3.1.29 | Gene3D:2.20.25.660 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | InterPro:IPR000626 | InterPro:IPR038582 | PFAM:PF00240 | PFAM:PF01599 | PRINTS:PR00348 |
| ScanProsite:PS00299 | PFscan:PS50053 | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF235 | InterPro:Ribosomal_S27a | InterPro:Ribosomal_zn-bd |
| InterPro:S27a-like_sf | SMART:SM00213 | SMART:SM01402 | SUPFAM:SSF54236 | SUPFAM:SSF57829 | EnsemblPlantsGene:TraesCS1B01G182700 |
| EnsemblPlants:TraesCS1B01G182700.1 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS | InterPro:Ubiquitin_dom | TIGR:cd01803 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:329490934..329491422
Molecular Weight (calculated)
18066.6 Da
IEP (calculated)
9.369
GRAVY (calculated)
-0.733
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGAKKR KKKTYSTPKK VKHEREKTPL
101: AVLGYYRVDD ATGKVERLRK ECPNPDCGAG TFMAAHADRH ACGKCGLTYA YAEAQSPEID SD
101: AVLGYYRVDD ATGKVERLRK ECPNPDCGAG TFMAAHADRH ACGKCGLTYA YAEAQSPEID SD
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHKHKKVKL
101: AVLQFYKVDG SGKVQRLRKE CPNATCGAGT FMASHFDRHY CGKCGLTYVY QKEGAQE
101: AVLQFYKVDG SGKVQRLRKE CPNATCGAGT FMASHFDRHY CGKCGLTYVY QKEGAQE
Arabidopsis Description
RPS27ABUBQ6 [Source:UniProtKB/TrEMBL;Acc:A0A178VYW3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.