Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G040300.1 | Wheat | cytosol | 78.17 | 71.15 |
| TraesCS7B01G366400.1 | Wheat | cytosol | 28.87 | 53.25 |
| TraesCS7B01G366700.1 | Wheat | cytosol | 46.48 | 43.14 |
| TraesCS7B01G366600.1 | Wheat | cytosol | 47.18 | 42.95 |
| TraesCS6B01G176000.1 | Wheat | cytosol | 42.25 | 39.22 |
| TraesCS7B01G413800.1 | Wheat | cytosol | 41.55 | 38.56 |
| TraesCS5B01G222800.1 | Wheat | cytosol | 41.55 | 38.56 |
| TraesCS6B01G115100.1 | Wheat | cytosol | 47.18 | 38.29 |
| TraesCS4B01G218100.1 | Wheat | cytosol | 34.51 | 37.12 |
| TraesCS4B01G008400.1 | Wheat | cytosol | 33.1 | 36.43 |
| TraesCS4B01G218000.1 | Wheat | cytosol | 32.39 | 34.85 |
| TraesCS7B01G366800.1 | Wheat | cytosol | 46.48 | 34.55 |
| TraesCS2B01G480400.1 | Wheat | cytosol | 33.1 | 33.1 |
| TraesCS2B01G480300.1 | Wheat | cytosol | 33.1 | 33.1 |
| TraesCS7B01G390800.1 | Wheat | cytosol | 32.39 | 33.09 |
| TraesCS7B01G390900.1 | Wheat | cytosol | 32.39 | 33.09 |
| TraesCS1B01G241200.1 | Wheat | cytosol | 32.39 | 33.09 |
| TraesCS5B01G524500.1 | Wheat | cytosol | 23.24 | 33.0 |
| TraesCS1B01G425700.1 | Wheat | cytosol | 35.21 | 32.26 |
| TraesCS1B01G130900.1 | Wheat | cytosol | 35.21 | 32.26 |
| TraesCS6B01G164700.2 | Wheat | cytosol | 51.41 | 31.88 |
| TraesCS6B01G176400.1 | Wheat | cytosol | 30.28 | 31.85 |
| TraesCS5B01G260700.1 | Wheat | cytosol | 30.28 | 31.85 |
| TraesCS6B01G164600.1 | Wheat | cytosol | 50.7 | 31.44 |
| TraesCS2B01G480500.1 | Wheat | cytosol | 30.28 | 31.16 |
| TraesCS4B01G233100.1 | Wheat | cytosol | 33.1 | 30.52 |
| TraesCS3B01G567200.1 | Wheat | mitochondrion | 47.89 | 30.36 |
| TraesCS6B01G148000.2 | Wheat | cytosol | 50.7 | 30.25 |
| TraesCS1B01G182700.1 | Wheat | cytosol | 33.8 | 29.63 |
| TraesCS3B01G567300.1 | Wheat | mitochondrion | 44.37 | 28.9 |
| TraesCS2B01G480600.1 | Wheat | cytosol | 26.76 | 27.54 |
| TraesCS5B01G187200.1 | Wheat | cytosol | 27.46 | 27.46 |
| TraesCS3B01G572400.1 | Wheat | cytosol, mitochondrion | 28.87 | 26.97 |
| TraesCS3B01G569000.1 | Wheat | mitochondrion | 41.55 | 26.34 |
| TraesCS5B01G524600.1 | Wheat | cytosol | 25.35 | 26.28 |
| TraesCS7B01G354200.1 | Wheat | cytosol | 50.7 | 25.71 |
| TraesCS6B01G110300.1 | Wheat | cytosol | 47.89 | 25.19 |
| TraesCS3B01G567800.1 | Wheat | mitochondrion | 39.44 | 25.0 |
| TraesCS5B01G524700.1 | Wheat | cytosol | 23.24 | 23.74 |
| TraesCS7B01G354100.1 | Wheat | cytosol | 50.7 | 23.61 |
| CDX79728 | Canola | cytosol | 36.62 | 22.91 |
| TraesCS2B01G107800.1 | Wheat | cytosol | 24.65 | 22.88 |
| TraesCS3B01G568900.1 | Wheat | mitochondrion | 22.54 | 22.86 |
| TraesCS3B01G568000.1 | Wheat | cytosol | 46.48 | 22.15 |
| TraesCS6B01G012500.1 | Wheat | cytosol | 38.03 | 22.04 |
| TraesCS6B01G293300.1 | Wheat | plastid | 47.18 | 21.97 |
| TraesCS3B01G567400.1 | Wheat | cytosol | 45.77 | 21.89 |
| TraesCS3B01G569700.1 | Wheat | cytosol | 48.59 | 21.5 |
| TraesCS7B01G367600.1 | Wheat | cytosol | 45.07 | 21.26 |
| TraesCS3B01G567100.1 | Wheat | nucleus | 44.37 | 21.21 |
| TraesCS2B01G107600.1 | Wheat | cytosol | 20.42 | 20.71 |
| TraesCS7B01G354000.2 | Wheat | cytosol | 43.66 | 20.06 |
| TraesCS7B01G004300.1 | Wheat | cytosol | 30.28 | 19.72 |
| TraesCS5B01G080200.1 | Wheat | cytosol | 21.13 | 19.61 |
| TraesCS2B01G426500.1 | Wheat | cytosol | 21.13 | 19.61 |
| TraesCS7B01G381800.1 | Wheat | cytosol | 21.13 | 19.61 |
| TraesCS6B01G164900.1 | Wheat | cytosol | 21.13 | 19.61 |
| TraesCS7B01G367700.1 | Wheat | cytosol | 21.13 | 19.61 |
| TraesCS6B01G140600.1 | Wheat | cytosol | 21.13 | 19.61 |
| TraesCS4B01G387300.1 | Wheat | cytosol | 42.25 | 18.63 |
| TraesCS3B01G061600.1 | Wheat | cytosol | 29.58 | 16.94 |
| TraesCS4B01G389100.1 | Wheat | endoplasmic reticulum | 23.94 | 16.11 |
| TraesCS7B01G486200.1 | Wheat | cytosol | 32.39 | 15.81 |
| TraesCS5B01G386500.1 | Wheat | nucleus | 38.03 | 13.99 |
| TraesCS1B01G325300.1 | Wheat | cytosol | 35.92 | 12.85 |
| TraesCS7B01G044300.1 | Wheat | cytosol | 5.63 | 12.7 |
| TraesCS5B01G387000.1 | Wheat | cytosol | 34.51 | 7.16 |
| TraesCS5B01G386900.1 | Wheat | cytosol | 1.41 | 0.51 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G043200.1 | EnsemblPlantsGene:TraesCS3B01G043200 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF240 |
| PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | SMART:SM00213 | SUPFAM:SSF54236 | MapMan:35.1 |
Description
No Description!
Coordinates
chr3B:+:22199623..22200051
Molecular Weight (calculated)
16162.4 Da
IEP (calculated)
7.386
GRAVY (calculated)
-0.470
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIHVVETLT GRAMNLAVTS SDTVNNVKAK IHEWHGFPKD QQCLIFANRQ LDDDDDEGKT LADLNIRNDT TLLLVLRSRC PRGRTNIYVK TLPGKFYNLE
101: VDSADTIYNV KEKIWSMDGI PPDLRKEIPV CSRGSCIPEQ KF
101: VDSADTIYNV KEKIWSMDGI PPDLRKEIPV CSRGSCIPEQ KF
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGF
Arabidopsis Description
UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.