Factsheet for TraesCS4B01G389100.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 2
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G366400.1	Wheat	cytosol	20.38	55.84
TraesCS5B01G524500.1	Wheat	cytosol	18.96	40.0
TraesCS4B01G008400.1	Wheat	cytosol	22.75	37.21
TraesCS4B01G218000.1	Wheat	cytosol	22.27	35.61
TraesCS4B01G218100.1	Wheat	cytosol	22.27	35.61
TraesCS7B01G366700.1	Wheat	cytosol	25.12	34.64
TraesCS7B01G366600.1	Wheat	cytosol	25.59	34.62
TraesCS1B01G241200.1	Wheat	cytosol	22.27	33.81
TraesCS7B01G390900.1	Wheat	cytosol	22.27	33.81
TraesCS7B01G390800.1	Wheat	cytosol	22.27	33.81
TraesCSU01G124300.1	Wheat	cytosol	47.39	33.33
TraesCS5B01G260700.1	Wheat	cytosol	21.33	33.33
TraesCS6B01G176400.1	Wheat	cytosol	21.33	33.33
TraesCS2B01G480400.1	Wheat	cytosol	22.27	33.1
TraesCS2B01G480300.1	Wheat	cytosol	22.27	33.1
TraesCS5B01G222800.1	Wheat	cytosol	23.7	32.68
TraesCS7B01G413800.1	Wheat	cytosol	23.7	32.68
TraesCS6B01G176000.1	Wheat	cytosol	23.22	32.03
TraesCS4B01G233100.1	Wheat	cytosol	22.75	31.17
TraesCS5B01G187200.1	Wheat	cytosol	20.85	30.99
TraesCS5B01G524600.1	Wheat	cytosol	19.91	30.66
TraesCS6B01G115100.1	Wheat	cytosol	25.12	30.29
TraesCS7B01G044300.1	Wheat	cytosol	9.0	30.16
TraesCS1B01G325300.1	Wheat	cytosol	55.92	29.72
TraesCS2B01G480500.1	Wheat	cytosol	19.43	29.71
TraesCS1B01G130900.1	Wheat	cytosol	21.33	29.03
TraesCS1B01G425700.1	Wheat	cytosol	21.33	29.03
TraesCS7B01G366800.1	Wheat	cytosol	25.59	28.27
TraesCS2B01G480600.1	Wheat	cytosol	18.48	28.26
TraesCS5B01G524700.1	Wheat	cytosol	18.01	27.34
TraesCS1B01G182700.1	Wheat	cytosol	20.85	27.16
TraesCS2B01G107600.1	Wheat	cytosol	17.06	25.71
TraesCS2B01G107800.1	Wheat	cytosol	18.48	25.49
TraesCS3B01G572400.1	Wheat	cytosol, mitochondrion	18.01	25.0
TraesCS3B01G043200.1	Wheat	cytosol	16.11	23.94
TraesCS6B01G164600.1	Wheat	cytosol	25.59	23.58
TraesCS6B01G164700.2	Wheat	cytosol	25.12	23.14
TraesCS6B01G148000.2	Wheat	cytosol	25.59	22.69
TraesCS3B01G567300.1	Wheat	mitochondrion	22.75	22.02
TraesCS3B01G568900.1	Wheat	mitochondrion	14.22	21.43
TraesCS3B01G567200.1	Wheat	mitochondrion	22.75	21.43
TraesCS6B01G110300.1	Wheat	cytosol	25.59	20.0
TraesCS7B01G354200.1	Wheat	cytosol	25.59	19.29
TraesCS3B01G567800.1	Wheat	mitochondrion	20.38	19.2
TraesCS6B01G293300.1	Wheat	plastid	27.49	19.02
TraesCS3B01G569000.1	Wheat	mitochondrion	19.91	18.75
TraesCS7B01G354100.1	Wheat	cytosol	25.59	17.7
TraesCS7B01G354000.2	Wheat	cytosol	25.59	17.48
TraesCS6B01G012500.1	Wheat	cytosol	19.91	17.14
CDX79728	Canola	cytosol	18.01	16.74
TraesCS7B01G367600.1	Wheat	cytosol	22.75	15.95
TraesCS3B01G568000.1	Wheat	cytosol	21.8	15.44
TraesCS4B01G387300.1	Wheat	cytosol	22.27	14.6
TraesCS3B01G061600.1	Wheat	cytosol	17.06	14.52
TraesCS3B01G567400.1	Wheat	cytosol	20.38	14.48
TraesCS3B01G569700.1	Wheat	cytosol	21.8	14.33
TraesCS3B01G567100.1	Wheat	nucleus	19.43	13.8
TraesCS7B01G486200.1	Wheat	cytosol	16.59	12.03
TraesCS7B01G004300.1	Wheat	cytosol	11.85	11.47
TraesCS5B01G386500.1	Wheat	nucleus	17.54	9.59
TraesCS2B01G426500.1	Wheat	cytosol	5.21	7.19
TraesCS6B01G164900.1	Wheat	cytosol	5.21	7.19
TraesCS6B01G140600.1	Wheat	cytosol	5.21	7.19
TraesCS7B01G367700.1	Wheat	cytosol	5.21	7.19
TraesCS7B01G381800.1	Wheat	cytosol	5.21	7.19
TraesCS5B01G080200.1	Wheat	cytosol	5.21	7.19
TraesCS5B01G387000.1	Wheat	cytosol	20.38	6.29
TraesCS5B01G386900.1	Wheat	cytosol	2.37	1.27

Protein Annotations

EnsemblPlants:TraesCS4B01G389100.1	EnsemblPlantsGene:TraesCS4B01G389100	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	PANTHER:PTHR10666
PANTHER:PTHR10666:SF207	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ScanProsite:PS00299	SignalP:SignalP-noTM
SMART:SM00213	SUPFAM:SSF54236	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4B:-:665914703..665916163

Molecular Weight (calculated)

23977.5 Da

IEP (calculated)

6.926

GRAVY (calculated)

0.010

Length

211 amino acids

Sequence
(BLAST)

001: MLLLLIIVAF VSDAELRKSD SAADNSQLKM EIFVKIQSTN LRIKRKIHCL KTVILEVKGS DTIWDVKDKI RDKEGIPVGQ QRLIFGSKLL VGSCTLEDYS
101: IVEESALTLD LVHIFVRPLT DRIMTIDVDR EDTISSVKAM IFEKNGIPPR RQRLCFAGKQ LEDGLTLADY DVYNESTLFL VVRLHKCEGG RMHINIMVKT
201: LNDKIITTEV E

Best Arabidopsis Sequence Match ( AT4G02890.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.