Factsheet for TraesCS4A01G086400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G218000.1	Wheat	cytosol	100.0	100.0
TraesCS4D01G218300.1	Wheat	cytosol	90.15	96.75
TraesCS7A01G465300.1	Wheat	cytosol, golgi	54.55	93.51
TraesCS2A01G475100.1	Wheat	cytosol	53.03	90.91
TraesCS5A01G073800.1	Wheat	cytosol	56.06	90.24
TraesCS4A01G086300.1	Wheat	cytosol	81.82	90.0
TraesCS4A01G306500.1	Wheat	cytosol	83.33	85.27
GSMUA_Achr11P...	Banana	cytosol	51.52	83.95
TraesCS2A01G458100.1	Wheat	cytosol	81.82	76.06
TraesCS6A01G148100.1	Wheat	cytosol	77.27	75.56
TraesCS2A01G458000.1	Wheat	cytosol	81.06	75.35
TraesCS7A01G487500.1	Wheat	cytosol	78.03	74.1
TraesCS4A01G077000.1	Wheat	cytosol	83.33	69.62
TraesCS2A01G458600.1	Wheat	cytosol	69.7	66.19
TraesCS2A01G458800.1	Wheat	cytosol	68.18	65.22
HORVU4Hr1G061900.2	Barley	nucleus, plastid	92.42	63.87
TraesCS5A01G196400.1	Wheat	cytosol	67.42	62.24
TraesCS1A01G227100.1	Wheat	cytosol	78.79	61.54
TraesCS2A01G093300.1	Wheat	cytosol	63.64	57.14
TraesCS1A01G105400.1	Wheat	cytosol	62.88	53.55
TraesCS1A01G397400.1	Wheat	cytosol	62.88	53.55
TraesCS1A01G397500.1	Wheat	golgi, unclear	62.88	53.55
TraesCS7A01G506300.1	Wheat	cytosol, plastid	59.85	51.63
TraesCS7A01G466500.1	Wheat	cytosol	62.12	51.25
TraesCS1A01G166000.1	Wheat	unclear	62.88	51.23
TraesCS5A01G196700.1	Wheat	cytosol	52.27	51.11
TraesCS5A01G224000.1	Wheat	cytosol	59.09	50.98
TraesCS1A01G202800.1	Wheat	cytosol	59.85	50.97
TraesCS2A01G408200.1	Wheat	cytosol	62.88	50.92
TraesCS6A01G147500.1	Wheat	cytosol	58.33	50.33
TraesCS7A01G141700.1	Wheat	cytosol	59.09	50.32
TraesCS6A01G087800.1	Wheat	extracellular	62.12	47.95
TraesCS7A01G453500.1	Wheat	cytosol	61.36	47.37
TraesCS7A01G466200.1	Wheat	cytosol	52.27	46.94
TraesCS6A01G087100.1	Wheat	cytosol	65.15	37.55
TraesCS5A01G551700.1	Wheat	cytosol	44.7	36.88
TraesCS7A01G453600.1	Wheat	cytosol	65.91	36.71
TraesCS2A01G408500.1	Wheat	cytosol	63.64	36.68
TraesCS3A01G504200.1	Wheat	cytosol	42.42	35.67
TraesCS7A01G465600.1	Wheat	cytosol	60.61	34.93
TraesCS3A01G504300.1	Wheat	cytosol	40.15	33.76
TraesCS7A01G105500.1	Wheat	cytosol	34.09	32.85
TraesCS7A01G105400.1	Wheat	cytosol	34.85	31.72
TraesCS3A01G040300.1	Wheat	cytosol	35.61	30.13
TraesCS3A01G503800.1	Wheat	cytosol	27.27	29.27
TraesCS7A01G453300.1	Wheat	cytosol	65.91	28.62
TraesCS3A01G503700.1	Wheat	cytosol, mitochondrion	32.58	27.74
TraesCS3A01G504500.1	Wheat	cytosol	45.45	26.79
TraesCS6A01G266000.1	Wheat	cytosol	65.91	26.69
TraesCS3A01G504100.1	Wheat	cytosol, mitochondrion	43.94	25.89
TraesCS5A01G292600.1	Wheat	cytosol	33.33	25.88
TraesCS7A01G027400.1	Wheat	cytosol	42.42	25.69
TraesCS3A01G504400.1	Wheat	cytosol	42.42	25.0
TraesCS3A01G040600.1	Wheat	cytosol	37.12	20.94
TraesCS3A01G504600.1	Wheat	nucleus	43.18	19.13
TraesCS3A01G504000.1	Wheat	cytosol	43.18	19.13
TraesCS6A01G119700.2	Wheat	cytosol	21.97	12.66
TraesCS7A01G453400.1	Wheat	cytosol	10.61	9.21
TraesCS6A01G136700.1	Wheat	cytosol	10.61	9.15
TraesCS6A01G112400.1	Wheat	cytosol	10.61	9.15
TraesCS1A01G313500.3	Wheat	cytosol, plastid	40.15	8.94

Protein Annotations

MapMan:17.1.2.1.43	Gene3D:2.20.28.70	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR000626	InterPro:IPR038587	InterPro:L40e_sf	PFAM:PF00240	PFAM:PF01020
PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF255	InterPro:Ribosomal_L40e
InterPro:Ribosomal_zn-bd	SMART:SM00213	SMART:SM01377	SUPFAM:SSF54236	SUPFAM:SSF57829	EnsemblPlantsGene:TraesCS4A01G086400
EnsemblPlants:TraesCS4A01G086400.1	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	TIGR:cd01803

Description

No Description!

Coordinates

chr4A:+:90591203..90593243

Molecular Weight (calculated)

14939.4 Da

IEP (calculated)

10.396

GRAVY (calculated)

-0.645

Length

132 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDAVKAKI QDKEGIPPDQ QRLIFAGKQL DDGRTLADYN IQKESTIHLV LRLRGGGCMI EPNLKALAQK YNQGKLICRK
101: CYSRLPPKAK SCRKKKCGHS NQLRSKKKCR YC

Best Arabidopsis Sequence Match ( AT2G35635.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYAIEGG SVLHLVLALR GGLL

Arabidopsis Description

RUB2UBQ7 [Source:UniProtKB/TrEMBL;Acc:A0A178VL95]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.