Factsheet for TraesCS7A01G453500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G20620.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT5G20620.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT5G20620.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G465300.1	Wheat	cytosol, golgi	43.86	97.4
TraesCS2A01G475100.1	Wheat	cytosol	42.69	94.81
TraesCS5A01G073800.1	Wheat	cytosol	44.44	92.68
TraesCS7A01G466500.1	Wheat	cytosol	71.34	76.25
TraesCS2A01G408200.1	Wheat	cytosol	71.93	75.46
TraesCS6A01G087800.1	Wheat	extracellular	73.1	73.1
TraesCS7A01G506300.1	Wheat	cytosol, plastid	64.91	72.55
TraesCS5A01G224000.1	Wheat	cytosol	63.74	71.24
TraesCS6A01G147500.1	Wheat	cytosol	63.16	70.59
TraesCS1A01G202800.1	Wheat	cytosol	63.16	69.68
TraesCS4A01G086300.1	Wheat	cytosol	48.54	69.17
TraesCS7A01G141700.1	Wheat	cytosol	62.57	69.03
TraesCS4A01G306500.1	Wheat	cytosol	49.12	65.12
TraesCS4A01G086400.1	Wheat	cytosol	47.37	61.36
TraesCS6A01G148100.1	Wheat	cytosol	46.78	59.26
TraesCS7A01G487500.1	Wheat	cytosol	47.37	58.27
TraesCS2A01G458000.1	Wheat	cytosol	47.95	57.75
TraesCS2A01G458100.1	Wheat	cytosol	47.95	57.75
TraesCS1A01G397400.1	Wheat	cytosol	50.88	56.13
TraesCS1A01G397500.1	Wheat	golgi, unclear	50.88	56.13
TraesCS1A01G105400.1	Wheat	cytosol	50.88	56.13
TraesCS5A01G551700.1	Wheat	cytosol	50.29	53.75
TraesCS3A01G504200.1	Wheat	cytosol	49.12	53.5
TraesCS4A01G077000.1	Wheat	cytosol	49.12	53.16
TraesCS1A01G166000.1	Wheat	unclear	50.29	53.09
TraesCS7A01G466200.1	Wheat	cytosol	45.61	53.06
TraesCS2A01G408500.1	Wheat	cytosol	70.18	52.4
TraesCS7A01G453600.1	Wheat	cytosol	72.51	52.32
TraesCS3A01G504300.1	Wheat	cytosol	47.37	51.59
TraesCS6A01G087100.1	Wheat	cytosol	68.42	51.09
TraesCS7A01G465600.1	Wheat	cytosol	67.84	50.66
TraesCS2A01G458800.1	Wheat	cytosol	40.35	50.0
TraesCS7A01G105400.1	Wheat	cytosol	41.52	48.97
TraesCS2A01G458600.1	Wheat	cytosol	39.77	48.92
TraesCS5A01G196400.1	Wheat	cytosol	39.77	47.55
TraesCS1A01G227100.1	Wheat	cytosol	46.78	47.34
TraesCS7A01G105500.1	Wheat	cytosol	37.43	46.72
TraesCS5A01G196700.1	Wheat	cytosol	36.84	46.67
TraesCS3A01G503800.1	Wheat	cytosol	33.33	46.34
TraesCS3A01G040300.1	Wheat	cytosol	39.77	43.59
TraesCS6A01G119700.2	Wheat	cytosol	56.14	41.92
TraesCS7A01G453300.1	Wheat	cytosol	72.51	40.79
AT5G20620.1	Thale cress	cytosol	88.89	39.79
TraesCS2A01G093300.1	Wheat	cytosol	33.92	39.46
TraesCS3A01G504100.1	Wheat	cytosol, mitochondrion	50.88	38.84
TraesCS3A01G504500.1	Wheat	cytosol	50.88	38.84
TraesCS6A01G266000.1	Wheat	cytosol	72.51	38.04
TraesCS5A01G292600.1	Wheat	cytosol	37.43	37.65
AT5G03240.3	Thale cress	cytosol	67.25	37.58
TraesCS3A01G504400.1	Wheat	cytosol	49.12	37.5
TraesCS7A01G027400.1	Wheat	cytosol	44.44	34.86
TraesCS6A01G136700.1	Wheat	cytosol	28.07	31.37
TraesCS6A01G112400.1	Wheat	cytosol	28.07	31.37
TraesCS3A01G503700.1	Wheat	cytosol, mitochondrion	28.07	30.97
TraesCS7A01G453400.1	Wheat	cytosol	27.49	30.92
TraesCS3A01G040600.1	Wheat	cytosol	40.35	29.49
TraesCS3A01G504000.1	Wheat	cytosol	47.95	27.52
TraesCS3A01G504600.1	Wheat	nucleus	47.37	27.18
PGSC0003DMT400037403	Potato	cytosol	67.84	21.76
TraesCS1A01G313500.3	Wheat	cytosol, plastid	56.14	16.19

Protein Annotations

EnsemblPlants:TraesCS7A01G453500.1	EnsemblPlantsGene:TraesCS7A01G453500	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	PANTHER:PTHR10666
PANTHER:PTHR10666:SF240	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ScanProsite:PS00299	SMART:SM00213
SUPFAM:SSF54236	TIGR:cd01803	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7A:-:647933828..647934662

Molecular Weight (calculated)

19180.3 Da

IEP (calculated)

7.684

GRAVY (calculated)

-0.368

Length

171 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVDMQIFVK
101: TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG Q

Best Arabidopsis Sequence Match ( AT4G05050.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.