Factsheet for AT5G03240.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G087800.1	Wheat	extracellular	47.06	84.21
AT2G35635.1	Thale cress	cytosol	37.91	75.32
AT1G31340.1	Thale cress	cytosol	38.24	75.0
TraesCS7A01G453500.1	Wheat	cytosol	37.58	67.25
AT2G36170.1	Thale cress	cytosol	27.12	64.84
AT3G52590.1	Thale cress	cytosol	27.12	64.84
AT5G37640.1	Thale cress	cytosol	65.03	61.8
AT5G20620.1	Thale cress	cytosol	75.16	60.21
AT1G55060.1	Thale cress	cytosol	43.46	57.83
PGSC0003DMT400037403	Potato	cytosol	99.02	56.85
AT3G62250.1	Thale cress	cytosol	28.1	54.78
AT2G47110.1	Thale cress	cytosol	27.78	54.14
AT1G23410.1	Thale cress	cytosol	27.45	53.85
AT4G02890.3	Thale cress	cytosol	50.0	50.16
AT1G65350.1	Thale cress	cytosol	49.67	47.65
AT4G05320.2	Thale cress	cytosol	50.0	33.48
AT4G05050.2	Thale cress	cytosol	22.22	29.69
AT3G09790.2	Thale cress	cytosol	42.16	20.44

Protein Annotations

MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EntrezGene:831899	EntrezGene:832184	UniProt:A0A1P8BGQ7	ProteinID:AED90574.1
ProteinID:AED90575.1	ProteinID:AED90576.1	EMBL:AK317101	ProteinID:ANM70788.1	ArrayExpress:AT5G03240	EnsemblPlantsGene:AT5G03240
RefSeq:AT5G03240	TAIR:AT5G03240	RefSeq:AT5G03240-TAIR-G	EnsemblPlants:AT5G03240.3	TAIR:AT5G03240.3	Unigene:At.46169
ProteinID:BAB08384.1	EMBL:BT002420	EMBL:BT025868	ProteinID:CAB86091.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005773	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009628
GO:GO:0009987	GO:GO:0010224	GO:GO:0019538	InterPro:IPR000626	EMBL:L05363	RefSeq:NP_001031824.1
RefSeq:NP_001332370.1	RefSeq:NP_568112.2	RefSeq:NP_851029.1	PFAM:PF00240	PO:PO:0000013	PO:PO:0000014
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025195	PO:PO:0025281	PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR45095
PANTHER:PTHR45095:SF2	UniProt:Q1EC66	SMART:SM00213	SUPFAM:SSF54236	Symbol:UBQ3	UniParc:UPI000016DA65
InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	:	:

Description

UBQ3Ubiquitin 4 [Source:UniProtKB/TrEMBL;Acc:A0A1P8BGQ7]

Coordinates

chr5:-:771725..773515

Molecular Weight (calculated)

34281.4 Da

IEP (calculated)

7.816

GRAVY (calculated)

-0.435

Length

306 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGSF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.