Factsheet for AT5G37640.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	22.98	96.1
HORVU4Hr1G040980.1	Barley	cytosol	14.91	96.0
EER89210	Sorghum	cytosol	22.67	92.41
AT1G55060.1	Thale cress	cytosol	63.35	88.7
TraesCS6B01G115100.1	Wheat	cytosol	43.79	80.57
PGSC0003DMT400057275	Potato	cytosol	47.2	80.0
AT2G35635.1	Thale cress	cytosol	36.34	75.97
AT1G31340.1	Thale cress	cytosol	36.65	75.64
Os06t0673500-01	Rice	cytosol	47.2	72.73
Bra009542.1-P	Field mustard	cytosol	51.86	72.61
AT4G02890.3	Thale cress	cytosol	67.08	70.82
AT1G65350.1	Thale cress	cytosol	66.15	66.77
AT3G52590.1	Thale cress	cytosol	26.09	65.62
AT2G36170.1	Thale cress	cytosol	26.09	65.62
AT5G03240.3	Thale cress	cytosol	61.8	65.03
AT4G05050.2	Thale cress	cytosol	45.34	63.76
TraesCS7B01G367600.1	Wheat	cytosol	58.07	62.13
AT3G62250.1	Thale cress	cytosol	29.19	59.87
TraesCS7A01G466200.1	Wheat	cytosol	27.33	59.86
AT2G47110.1	Thale cress	cytosol	28.88	59.24
AT1G23410.1	Thale cress	cytosol	27.64	57.05
AT5G20620.1	Thale cress	cytosol	63.98	53.93
AT4G05320.2	Thale cress	cytosol	68.32	48.14
HORVU7Hr1G103380.2	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.43	44.52
AT3G09790.2	Thale cress	cytosol	60.56	30.9

Protein Annotations

MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EntrezGene:833742	ProteinID:AED94213.1	ArrayExpress:AT5G37640	EnsemblPlantsGene:AT5G37640
RefSeq:AT5G37640	TAIR:AT5G37640	RefSeq:AT5G37640-TAIR-G	EnsemblPlants:AT5G37640.1	TAIR:AT5G37640.1	Unigene:At.65595
ProteinID:BAB08310.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005618
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0006511	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009719
GO:GO:0009735	GO:GO:0009987	GO:GO:0016020	GO:GO:0019538	GO:GO:0030312	InterPro:IPR000626
RefSeq:NP_568552.1	PFAM:PF00240	PO:PO:0000005	PO:PO:0007131	PRINTS:PR00348	ScanProsite:PS00299
PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF238	UniProt:Q9FHQ6	SMART:SM00213	SUPFAM:SSF54236
Symbol:UBQ9	UniParc:UPI000009C5C3	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom
SEG:seg	:	:	:	:	:

Description

UBQ9Polyubiquitin 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHQ6]

Coordinates

chr5:-:14952782..14953750

Molecular Weight (calculated)

36258.8 Da

IEP (calculated)

6.072

GRAVY (calculated)

-0.281

Length

322 amino acids

Sequence
(BLAST)

001: MSMQIHAKTL TEKTITIDVV SSDTINNVKA KIQDIEGIPL DQQRLIFSGK LLDDGRTLAD YSIQKDSILH LALRLRGGMQ IFVKTLTGKT ITLEVESSDT
101: IDNVKAKIQD KEGVPPDQQR LIFAGKQLDD GRTLADYNIQ KESTLHLVLR LRGGMQIFVR TLTRKTIALE VESSDTTDNV KAKIQDKEGI PPDQQRLIFA
201: GKQLEDGRTL ADYNIQKEST LHLVLRLCGG MQIFVNTLTG KTITLEVESS DTIDNVKAKI QDKERIQPDQ QRLIFAGEQL EDGYYTLADY NIQKESTLHL
301: VLRLRGGECF GFIFLFLLCF NS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.