Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G040980.1 | Barley | cytosol | 31.61 | 98.0 |
| TraesCS7D01G454100.1 | Wheat | cytosol, golgi, unclear | 40.0 | 80.52 |
| EER89210 | Sorghum | cytosol | 39.35 | 77.22 |
| HORVU4Hr1G001170.5 | Barley | cytosol | 40.0 | 56.36 |
| HORVU4Hr1G065100.3 | Barley | cytosol | 40.0 | 55.36 |
| HORVU7Hr1G109650.2 | Barley | cytosol | 40.0 | 44.29 |
| HORVU7Hr1G113500.1 | Barley | cytosol, extracellular | 40.0 | 40.52 |
| HORVU5Hr1G072680.1 | Barley | cytosol | 38.06 | 39.07 |
| HORVU4Hr1G061980.1 | Barley | cytosol | 29.68 | 38.33 |
| HORVU6Hr1G014910.1 | Barley | cytosol | 39.35 | 37.2 |
| TraesCS7A01G466200.1 | Wheat | cytosol | 34.19 | 36.05 |
| HORVU7Hr1G103160.4 | Barley | cytosol | 41.94 | 35.91 |
| TraesCS6B01G115100.1 | Wheat | cytosol | 40.0 | 35.43 |
| HORVU2Hr1G104410.26 | Barley | cytosol | 40.0 | 35.03 |
| HORVU1Hr1G023660.1 | Barley | extracellular | 40.0 | 34.64 |
| HORVU7Hr1G029150.2 | Barley | cytosol | 40.0 | 34.07 |
| HORVU7Hr1G029070.1 | Barley | cytosol | 40.0 | 32.98 |
| HORVU7Hr1G029100.1 | Barley | cytosol | 40.0 | 32.46 |
| HORVU5Hr1G065170.1 | Barley | cytosol | 40.65 | 31.98 |
| HORVU4Hr1G061900.2 | Barley | nucleus, plastid | 38.71 | 31.41 |
| HORVU3Hr1G014180.3 | Barley | cytosol | 40.65 | 31.03 |
| HORVU3Hr1G014150.2 | Barley | cytosol | 40.65 | 31.03 |
| Os06t0673500-01 | Rice | cytosol | 41.29 | 30.62 |
| Bra009542.1-P | Field mustard | cytosol | 45.16 | 30.43 |
| HORVU5Hr1G056730.1 | Barley | cytosol, plastid | 32.9 | 30.36 |
| HORVU6Hr1G014970.1 | Barley | plastid | 42.58 | 27.5 |
| HORVU3Hr1G111000.1 | Barley | cytosol | 27.1 | 27.45 |
| HORVU7Hr1G103550.4 | Barley | cytosol | 40.0 | 27.07 |
| HORVU0Hr1G038500.2 | Barley | cytosol | 40.0 | 25.62 |
| HORVU6Hr1G029050.1 | Barley | cytosol | 32.26 | 25.25 |
| HORVU6Hr1G026200.5 | Barley | cytosol | 40.0 | 24.7 |
| HORVU1Hr1G087690.8 | Barley | nucleus | 40.0 | 23.13 |
| HORVU2Hr1G104440.1 | Barley | cytosol | 41.29 | 22.86 |
| AT5G37640.1 | Thale cress | cytosol | 44.52 | 21.43 |
| HORVU3Hr1G110900.1 | Barley | cytosol | 30.97 | 21.33 |
| HORVU6Hr1G016150.3 | Barley | cytosol | 26.45 | 21.24 |
| HORVU7Hr1G102840.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 41.29 | 20.13 |
| HORVU5Hr1G019590.12 | Barley | extracellular | 40.65 | 19.15 |
| HORVU6Hr1G021700.4 | Barley | cytosol | 40.65 | 18.64 |
| TraesCS7B01G367600.1 | Wheat | cytosol | 34.19 | 17.61 |
| HORVU7Hr1G103330.1 | Barley | cytosol | 43.87 | 17.3 |
| HORVU3Hr1G110970.1 | Barley | cytosol, nucleus, plastid | 30.32 | 16.04 |
| HORVU1Hr1G043930.8 | Barley | plastid | 41.29 | 15.2 |
| HORVU6Hr1G026260.1 | Barley | cytosol, extracellular, plasma membrane | 45.16 | 15.02 |
| HORVU7Hr1G103170.9 | Barley | cytosol, plasma membrane | 43.23 | 12.57 |
| HORVU6Hr1G026280.2 | Barley | plastid | 29.68 | 11.36 |
| HORVU4Hr1G089720.1 | Barley | nucleus | 26.45 | 10.35 |
| HORVU5Hr1G019600.6 | Barley | cytosol | 10.32 | 8.51 |
| HORVU6Hr1G020140.6 | Barley | cytosol | 9.03 | 7.29 |
| HORVU5Hr1G094230.2 | Barley | cytosol | 22.58 | 5.12 |
| HORVU7Hr1G107010.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | UniProt:A0A287XMP8 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:HORVU7Hr1G103380 | EnsemblPlants:HORVU7Hr1G103380.2 | InterPro:IPR000626 |
| PFAM:PF00240 | PRINTS:PR00348 | ScanProsite:PS00299 | PFscan:PS50053 | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF240 |
| SMART:SM00213 | SUPFAM:SSF54236 | TMHMM:TMhelix | UniParc:UPI000B478EF4 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf |
| InterPro:Ubiquitin_CS | InterPro:Ubiquitin_dom | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:613422147..613423383
Molecular Weight (calculated)
17307.1 Da
IEP (calculated)
5.559
GRAVY (calculated)
0.377
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIYITYFVQ VDMLIYSPAK DLALHALSIH WLVVVGQLLG SSLSSWFHLC CNFIFVAWWW PSGCSIVLTY CTYPCTITYS GYVCFALYLQ MQIFVKTLTG
101: KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQXXX
101: KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQXXX
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGF
Arabidopsis Description
UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.