Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G040980.1 | Barley | cytosol | 29.27 | 96.0 |
| HORVU4Hr1G001170.5 | Barley | cytosol | 45.73 | 68.18 |
| HORVU4Hr1G065100.3 | Barley | cytosol | 45.73 | 66.96 |
| HORVU7Hr1G109650.2 | Barley | cytosol | 47.56 | 55.71 |
| HORVU7Hr1G113500.1 | Barley | cytosol, extracellular | 48.17 | 51.63 |
| HORVU4Hr1G061980.1 | Barley | cytosol | 37.2 | 50.83 |
| HORVU5Hr1G072680.1 | Barley | cytosol | 46.34 | 50.33 |
| HORVU2Hr1G104410.26 | Barley | cytosol | 48.17 | 44.63 |
| HORVU7Hr1G103160.4 | Barley | cytosol | 48.17 | 43.65 |
| HORVU1Hr1G023660.1 | Barley | extracellular | 46.95 | 43.02 |
| HORVU7Hr1G029150.2 | Barley | cytosol | 47.56 | 42.86 |
| HORVU7Hr1G029070.1 | Barley | cytosol | 46.95 | 40.96 |
| HORVU7Hr1G029100.1 | Barley | cytosol | 47.56 | 40.84 |
| HORVU5Hr1G065170.1 | Barley | cytosol | 48.17 | 40.1 |
| HORVU7Hr1G103380.2 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 37.2 | 39.35 |
| HORVU3Hr1G014180.3 | Barley | cytosol | 46.95 | 37.93 |
| HORVU3Hr1G014150.2 | Barley | cytosol | 46.95 | 37.93 |
| HORVU4Hr1G061900.2 | Barley | nucleus, plastid | 43.29 | 37.17 |
| HORVU7Hr1G103550.4 | Barley | cytosol | 50.0 | 35.81 |
| HORVU5Hr1G056730.1 | Barley | cytosol, plastid | 36.59 | 35.71 |
| HORVU3Hr1G111000.1 | Barley | cytosol | 32.32 | 34.64 |
| HORVU6Hr1G029050.1 | Barley | cytosol | 40.85 | 33.84 |
| HORVU6Hr1G026200.5 | Barley | cytosol | 50.0 | 32.67 |
| HORVU0Hr1G038500.2 | Barley | cytosol | 48.17 | 32.64 |
| HORVU6Hr1G014970.1 | Barley | plastid | 46.95 | 32.08 |
| HORVU6Hr1G016150.3 | Barley | cytosol | 36.59 | 31.09 |
| HORVU1Hr1G087690.8 | Barley | nucleus | 48.17 | 29.48 |
| HORVU2Hr1G104440.1 | Barley | cytosol | 48.17 | 28.21 |
| GSMUA_Achr5P00760_001 | Banana | cytosol | 28.66 | 27.33 |
| HORVU7Hr1G102840.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 50.0 | 25.79 |
| HORVU5Hr1G019590.12 | Barley | extracellular | 50.0 | 24.92 |
| HORVU6Hr1G021700.4 | Barley | cytosol | 49.39 | 23.96 |
| HORVU3Hr1G110900.1 | Barley | cytosol | 30.49 | 22.22 |
| HORVU7Hr1G103330.1 | Barley | cytosol | 49.39 | 20.61 |
| HORVU1Hr1G043930.8 | Barley | plastid | 46.95 | 18.29 |
| HORVU5Hr1G019600.6 | Barley | cytosol | 20.73 | 18.09 |
| HORVU3Hr1G110970.1 | Barley | cytosol, nucleus, plastid | 31.71 | 17.75 |
| HORVU6Hr1G026260.1 | Barley | cytosol, extracellular, plasma membrane | 50.0 | 17.6 |
| HORVU6Hr1G020140.6 | Barley | cytosol | 18.9 | 16.15 |
| HORVU7Hr1G103170.9 | Barley | cytosol, plasma membrane | 47.56 | 14.63 |
| HORVU4Hr1G089720.1 | Barley | nucleus | 28.05 | 11.62 |
| HORVU6Hr1G026280.2 | Barley | plastid | 26.22 | 10.62 |
| HORVU5Hr1G094230.2 | Barley | cytosol | 25.0 | 5.99 |
| HORVU7Hr1G107010.1 | Barley | cytosol | 4.27 | 4.58 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | UniProt:A0A287TE80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:HORVU6Hr1G014910 | EnsemblPlants:HORVU6Hr1G014910.1 | InterPro:IPR000626 | PFAM:PF00240 | PRINTS:PR00348 |
| ScanProsite:PS00299 | PFscan:PS50053 | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF240 | SMART:SM00213 | SUPFAM:SSF54236 |
| UniParc:UPI000B46C859 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS | InterPro:Ubiquitin_dom | SEG:seg |
Description
No Description!
Coordinates
chrchr6H:-:32501888..32502381
Molecular Weight (calculated)
14745.0 Da
IEP (calculated)
10.865
GRAVY (calculated)
-0.475
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIFVKTLTG KTTTLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX RRGCRWRRRR PAPPRGRSRG RTPPCTAAPP LLLLLRWLAC ELVGGEERET VLRC
101: XXXXXXXXXX RRGCRWRRRR PAPPRGRSRG RTPPCTAAPP LLLLLRWLAC ELVGGEERET VLRC
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYAIEGG SVLHLVLALR GGLL
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYAIEGG SVLHLVLALR GGLL
Arabidopsis Description
RUB2UBQ7 [Source:UniProtKB/TrEMBL;Acc:A0A178VL95]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.