Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 25.0 | 53.09 |
| GSMUA_Achr7P26310_001 | Banana | cytosol | 34.88 | 38.46 |
| GSMUA_Achr5P00970_001 | Banana | cytosol | 28.49 | 38.28 |
| GSMUA_Achr8P07770_001 | Banana | cytosol, unclear | 28.49 | 38.28 |
| GSMUA_Achr8P32920_001 | Banana | cytosol | 28.49 | 38.28 |
| GSMUA_Achr3P30150_001 | Banana | cytosol | 34.88 | 38.22 |
| GSMUA_Achr11P... | Banana | cytosol | 27.91 | 37.5 |
| GSMUA_Achr3P08430_001 | Banana | cytosol | 29.65 | 32.48 |
| GSMUA_Achr8P22260_001 | Banana | cytosol | 29.65 | 32.48 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular | 34.88 | 31.91 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.49 | 31.21 |
| GSMUA_Achr4P04260_001 | Banana | cytosol | 18.02 | 29.81 |
| HORVU6Hr1G014910.1 | Barley | cytosol | 27.33 | 28.66 |
| GSMUA_AchrUn_... | Banana | cytosol | 15.12 | 27.96 |
| GSMUA_Achr8P07340_001 | Banana | cytosol, plasma membrane | 15.12 | 18.84 |
| GSMUA_Achr1P24990_001 | Banana | cytosol, endoplasmic reticulum, mitochondrion, plastid | 16.86 | 18.24 |
| GSMUA_Achr9P30160_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P00760_001 | EnsemblPlants:GSMUA_Achr5T00760_001 | EnsemblPlantsGene:GSMUA_Achr5G00760_001 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR10666 |
| PANTHER:PTHR10666:SF238 | PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | SMART:SM00213 | SUPFAM:SSF54236 |
| UniParc:UPI000294C332 | UniProt:M0SUK5 | MapMan:35.1 | : | : | : |
Description
Polyubiquitin [Source:GMGC_GENE;Acc:GSMUA_Achr5G00760_001]
Coordinates
chr5:+:457297..457989
Molecular Weight (calculated)
19267.5 Da
IEP (calculated)
8.945
GRAVY (calculated)
-0.355
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIFVKTLTG KTIRLEQLED GRTLADYSIQ KESTLHLILR LRGGMQIFIK TLTGKTTTLE VESSDTIENV KAKMQDKEGI PESTLHLVMR LRGGGMQIFV
101: KTLTGNTITL EVESSDTIAN LKAKIHDKEG ISPDQQRLIF AGKQLEDGRT LDDYSIQKES TLHLVLRLRG GQ
101: KTLTGNTITL EVESSDTIAN LKAKIHDKEG ISPDQQRLIF AGKQLEDGRT LDDYSIQKES TLHLVLRLRG GQ
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF
Arabidopsis Description
UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.