Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- endoplasmic reticulum 1
- plastid 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P08430_001 | Banana | cytosol | 83.02 | 84.08 |
| GSMUA_Achr8P22260_001 | Banana | cytosol | 83.02 | 84.08 |
| GSMUA_AchrUn_... | Banana | cytosol | 82.39 | 83.44 |
| GSMUA_Achr11P... | Banana | cytosol | 28.93 | 56.79 |
| Zm00001d032616_P001 | Maize | plastid | 45.28 | 46.15 |
| GSMUA_Achr5P00970_001 | Banana | cytosol | 37.11 | 46.09 |
| GSMUA_Achr8P07770_001 | Banana | cytosol, unclear | 37.11 | 46.09 |
| GSMUA_Achr8P32920_001 | Banana | cytosol | 37.11 | 46.09 |
| GSMUA_Achr11P... | Banana | cytosol | 37.11 | 46.09 |
| GSMUA_Achr7P26310_001 | Banana | cytosol | 38.36 | 39.1 |
| GSMUA_Achr3P30150_001 | Banana | cytosol | 38.36 | 38.85 |
| GSMUA_Achr4P04260_001 | Banana | cytosol | 23.9 | 36.54 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular | 35.22 | 29.79 |
| GSMUA_Achr5P00760_001 | Banana | cytosol | 18.24 | 16.86 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.81 | 15.05 |
| GSMUA_Achr8P07340_001 | Banana | cytosol, plasma membrane | 10.69 | 12.32 |
| GSMUA_Achr9P30160_001 | Banana | cytosol | 5.03 | 10.39 |
Protein Annotations
| MapMan:17.1.3.1.29 | Gene3D:2.20.25.660 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr1G24990_001 | EnsemblPlants:GSMUA_Achr1P24990_001 | EnsemblPlants:GSMUA_Achr1T24990_001 | InterPro:IPR000626 | InterPro:IPR038582 |
| UniProt:M0S2V6 | PFAM:PF00240 | PFAM:PF01599 | PRINTS:PR00348 | PFscan:PS50053 | PANTHER:PTHR10666 |
| PANTHER:PTHR10666:SF257 | InterPro:Ribosomal_S27a | InterPro:Ribosomal_zn-bd | InterPro:S27a-like_sf | SMART:SM00213 | SMART:SM01402 |
| SUPFAM:SSF54236 | SUPFAM:SSF57829 | UniParc:UPI0002957A96 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom |
| SEG:seg | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G24990_001]
Coordinates
chr1:-:19375607..19376557
Molecular Weight (calculated)
18198.4 Da
IEP (calculated)
10.697
GRAVY (calculated)
-0.604
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRLTSLQSP QHLIFVCIST VTINRTNILR SSRVVEGIPP DQQRLIFAGK QLEDGRTLAD YNIQKESTLH LVLRLRGGAK KRKKKTYTKP KKIKHKKKKV
101: KLAVLQFYKV DDATGKVTRL RKECPNAECG AGTFMANHFD RHYCGKCGLT YVYQKAQGE
101: KLAVLQFYKV DDATGKVTRL RKECPNAECG AGTFMANHFD RHYCGKCGLT YVYQKAQGE
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHKHKKVKL
101: AVLQFYKVDG SGKVQRLRKE CPNATCGAGT FMASHFDRHY CGKCGLTYVY QKEGAQE
101: AVLQFYKVDG SGKVQRLRKE CPNATCGAGT FMASHFDRHY CGKCGLTYVY QKEGAQE
Arabidopsis Description
RPS27ABUBQ6 [Source:UniProtKB/TrEMBL;Acc:A0A178VYW3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.