Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G140400.1 | Wheat | nucleus | 86.87 | 87.31 |
| HORVU4Hr1G040980.1 | Barley | cytosol | 7.83 | 62.0 |
| HORVU7Hr1G103160.4 | Barley | cytosol | 25.25 | 55.25 |
| HORVU7Hr1G103550.4 | Barley | cytosol | 28.54 | 49.34 |
| HORVU6Hr1G016150.3 | Barley | cytosol | 23.99 | 49.22 |
| HORVU7Hr1G113500.1 | Barley | cytosol, extracellular | 18.43 | 47.71 |
| HORVU6Hr1G026200.5 | Barley | cytosol | 29.04 | 45.82 |
| HORVU7Hr1G107010.1 | Barley | cytosol | 17.68 | 45.75 |
| HORVU4Hr1G065100.3 | Barley | cytosol | 12.12 | 42.86 |
| HORVU4Hr1G001170.5 | Barley | cytosol | 11.36 | 40.91 |
| HORVU7Hr1G029150.2 | Barley | cytosol | 17.93 | 39.01 |
| HORVU7Hr1G029070.1 | Barley | cytosol | 18.18 | 38.3 |
| HORVU5Hr1G065170.1 | Barley | cytosol | 18.94 | 38.07 |
| HORVU7Hr1G029100.1 | Barley | cytosol | 18.18 | 37.7 |
| HORVU3Hr1G111000.1 | Barley | cytosol | 14.39 | 37.25 |
| HORVU7Hr1G102840.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 28.79 | 35.85 |
| HORVU4Hr1G061980.1 | Barley | cytosol | 10.86 | 35.83 |
| HORVU5Hr1G019590.12 | Barley | extracellular | 29.55 | 35.56 |
| HORVU3Hr1G014180.3 | Barley | cytosol | 17.68 | 34.48 |
| HORVU3Hr1G014150.2 | Barley | cytosol | 17.68 | 34.48 |
| HORVU7Hr1G109650.2 | Barley | cytosol | 12.12 | 34.29 |
| HORVU6Hr1G021700.4 | Barley | cytosol | 29.04 | 34.02 |
| HORVU5Hr1G072680.1 | Barley | cytosol | 12.63 | 33.11 |
| HORVU5Hr1G019600.6 | Barley | cytosol | 15.66 | 32.98 |
| HORVU3Hr1G110900.1 | Barley | cytosol | 18.43 | 32.44 |
| HORVU6Hr1G029050.1 | Barley | cytosol | 16.16 | 32.32 |
| HORVU1Hr1G023660.1 | Barley | extracellular | 14.39 | 31.84 |
| CDX79728 | Canola | cytosol | 18.18 | 31.72 |
| HORVU3Hr1G110970.1 | Barley | cytosol, nucleus, plastid | 22.47 | 30.38 |
| HORVU6Hr1G014970.1 | Barley | plastid | 17.42 | 28.75 |
| HORVU6Hr1G026260.1 | Barley | cytosol, extracellular, plasma membrane | 33.33 | 28.33 |
| HORVU6Hr1G020140.6 | Barley | cytosol | 13.64 | 28.12 |
| HORVU6Hr1G014910.1 | Barley | cytosol | 11.62 | 28.05 |
| HORVU5Hr1G056730.1 | Barley | cytosol, plastid | 11.87 | 27.98 |
| HORVU4Hr1G061900.2 | Barley | nucleus, plastid | 13.38 | 27.75 |
| HORVU2Hr1G104410.26 | Barley | cytosol | 12.37 | 27.68 |
| HORVU7Hr1G103330.1 | Barley | cytosol | 27.27 | 27.48 |
| HORVU7Hr1G103380.2 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 10.35 | 26.45 |
| HORVU0Hr1G038500.2 | Barley | cytosol | 15.66 | 25.62 |
| HORVU7Hr1G103170.9 | Barley | cytosol, plasma membrane | 33.08 | 24.58 |
| HORVU1Hr1G087690.8 | Barley | nucleus | 14.39 | 21.27 |
| HORVU2Hr1G104440.1 | Barley | cytosol | 13.64 | 19.29 |
| HORVU6Hr1G026280.2 | Barley | plastid | 16.67 | 16.3 |
| HORVU1Hr1G043930.8 | Barley | plastid | 16.92 | 15.91 |
| HORVU5Hr1G094230.2 | Barley | cytosol | 20.2 | 11.7 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G089720.1 | EnsemblPlantsGene:HORVU4Hr1G089720 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | ncoils:Coil | PANTHER:PTHR10666 |
| PANTHER:PTHR10666:SF239 | PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | SEG:seg | SMART:SM00213 |
| SUPFAM:SSF54236 | UniParc:UPI000B484EFD | UniProt:A0A287Q3V6 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr4H:-:643438068..643441387
Molecular Weight (calculated)
44625.5 Da
IEP (calculated)
8.558
GRAVY (calculated)
-0.602
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGGPEAAP PLEFPSAGWR GLYDRLQGLL PRVEALAADR ARLEEAVRLS DAREKSLHAR LLQADASRER WKAAYAELPP GTNPKLAELQ ERDLVDSQSG
101: KEALPDADNS QLKETSQKRR KLINDKTNKK KRTKLTNEET GQNKRTKLTN EMHLERCTMQ IFVKINCSIF RKKRKTHCLK TITLEVMGSN TIYDVKDKIQ
201: EKEGIPAGEQ RLMFGSELLV DSCSLEDYSI EEESTLTLDL VPRGMHIFIR TRSGKTMTIG VEGEDSLYSV KAKFFDETGI PPSRQRLFFA GKQLEDGRTL
301: ADYDVQNEST LHVVLRGITR QSGEMRISVK TVTGKKVIEH AMKRRQAIDN IKAWIYSELC ILPEEQQLSG EDGAPLAEVI RSSCTVVLQI RPPGGW
101: KEALPDADNS QLKETSQKRR KLINDKTNKK KRTKLTNEET GQNKRTKLTN EMHLERCTMQ IFVKINCSIF RKKRKTHCLK TITLEVMGSN TIYDVKDKIQ
201: EKEGIPAGEQ RLMFGSELLV DSCSLEDYSI EEESTLTLDL VPRGMHIFIR TRSGKTMTIG VEGEDSLYSV KAKFFDETGI PPSRQRLFFA GKQLEDGRTL
301: ADYDVQNEST LHVVLRGITR QSGEMRISVK TVTGKKVIEH AMKRRQAIDN IKAWIYSELC ILPEEQQLSG EDGAPLAEVI RSSCTVVLQI RPPGGW
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF
Arabidopsis Description
UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.