Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G269800.1 | Wheat | cytosol | 86.75 | 97.04 |
| TraesCS5B01G260700.1 | Wheat | cytosol | 86.09 | 96.3 |
| HORVU4Hr1G040980.1 | Barley | cytosol | 31.79 | 96.0 |
| TraesCS6D01G137400.1 | Wheat | cytosol | 81.46 | 91.11 |
| TraesCS6A01G148100.1 | Wheat | cytosol | 81.46 | 91.11 |
| TraesCS6B01G176400.1 | Wheat | cytosol | 80.13 | 89.63 |
| TraesCS1B01G241200.1 | Wheat | cytosol | 80.13 | 87.05 |
| TraesCS1D01G228700.1 | Wheat | cytosol | 76.82 | 83.45 |
| HORVU7Hr1G109650.2 | Barley | cytosol | 76.82 | 82.86 |
| EER97248 | Sorghum | cytosol | 72.19 | 80.15 |
| HORVU4Hr1G065100.3 | Barley | cytosol | 58.28 | 78.57 |
| EER97249 | Sorghum | cytosol | 72.19 | 77.31 |
| HORVU4Hr1G001170.5 | Barley | cytosol | 55.63 | 76.36 |
| KXG35893 | Sorghum | cytosol | 70.2 | 74.65 |
| TraesCS1A01G227100.1 | Wheat | cytosol | 82.78 | 73.96 |
| OQU89356 | Sorghum | cytosol | 67.55 | 73.38 |
| HORVU4Hr1G061980.1 | Barley | cytosol | 55.63 | 70.0 |
| HORVU2Hr1G104410.26 | Barley | cytosol | 70.86 | 60.45 |
| HORVU5Hr1G056730.1 | Barley | cytosol, plastid | 63.58 | 57.14 |
| HORVU4Hr1G061900.2 | Barley | nucleus, plastid | 66.23 | 52.36 |
| HORVU7Hr1G113500.1 | Barley | cytosol, extracellular | 51.66 | 50.98 |
| HORVU7Hr1G103160.4 | Barley | cytosol | 56.29 | 46.96 |
| HORVU6Hr1G014910.1 | Barley | cytosol | 50.33 | 46.34 |
| HORVU1Hr1G023660.1 | Barley | extracellular | 53.64 | 45.25 |
| Os07t0489500-00 | Rice | cytosol | 74.83 | 44.49 |
| HORVU7Hr1G029150.2 | Barley | cytosol | 52.98 | 43.96 |
| HORVU7Hr1G029070.1 | Barley | cytosol | 52.32 | 42.02 |
| HORVU7Hr1G029100.1 | Barley | cytosol | 52.98 | 41.88 |
| HORVU2Hr1G104440.1 | Barley | cytosol | 76.82 | 41.43 |
| HORVU5Hr1G065170.1 | Barley | cytosol | 52.98 | 40.61 |
| HORVU7Hr1G103380.2 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 39.07 | 38.06 |
| HORVU3Hr1G014150.2 | Barley | cytosol | 50.99 | 37.93 |
| HORVU3Hr1G014180.3 | Barley | cytosol | 50.99 | 37.93 |
| HORVU7Hr1G103550.4 | Barley | cytosol | 56.29 | 37.12 |
| HORVU3Hr1G111000.1 | Barley | cytosol | 36.42 | 35.95 |
| HORVU6Hr1G026200.5 | Barley | cytosol | 56.29 | 33.86 |
| HORVU6Hr1G016150.3 | Barley | cytosol | 43.05 | 33.68 |
| HORVU6Hr1G014970.1 | Barley | plastid | 52.32 | 32.92 |
| HORVU6Hr1G029050.1 | Barley | cytosol | 43.05 | 32.83 |
| HORVU0Hr1G038500.2 | Barley | cytosol | 50.33 | 31.41 |
| HORVU1Hr1G087690.8 | Barley | nucleus | 52.98 | 29.85 |
| HORVU7Hr1G102840.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 56.29 | 26.73 |
| HORVU5Hr1G019590.12 | Barley | extracellular | 57.62 | 26.44 |
| HORVU6Hr1G021700.4 | Barley | cytosol | 57.62 | 25.74 |
| HORVU3Hr1G110900.1 | Barley | cytosol | 37.09 | 24.89 |
| HORVU7Hr1G103330.1 | Barley | cytosol | 56.95 | 21.88 |
| HORVU5Hr1G019600.6 | Barley | cytosol | 25.83 | 20.74 |
| HORVU1Hr1G043930.8 | Barley | plastid | 53.64 | 19.24 |
| HORVU6Hr1G026260.1 | Barley | cytosol, extracellular, plasma membrane | 57.62 | 18.67 |
| HORVU3Hr1G110970.1 | Barley | cytosol, nucleus, plastid | 35.76 | 18.43 |
| HORVU6Hr1G020140.6 | Barley | cytosol | 22.52 | 17.71 |
| HORVU7Hr1G103170.9 | Barley | cytosol, plasma membrane | 56.95 | 16.14 |
| HORVU4Hr1G089720.1 | Barley | nucleus | 33.11 | 12.63 |
| HORVU6Hr1G026280.2 | Barley | plastid | 31.13 | 11.6 |
| HORVU7Hr1G107010.1 | Barley | cytosol | 7.95 | 7.84 |
| HORVU5Hr1G094230.2 | Barley | cytosol | 28.48 | 6.29 |
Protein Annotations
| MapMan:17.1.2.1.43 | Gene3D:2.20.28.70 | Gene3D:3.10.20.90 | UniProt:A0A287RRT7 | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:HORVU5Hr1G072680 | EnsemblPlants:HORVU5Hr1G072680.1 | InterPro:IPR000626 | InterPro:IPR038587 |
| InterPro:L40e_sf | PFAM:PF00240 | PFAM:PF01020 | PRINTS:PR00348 | ScanProsite:PS00299 | PFscan:PS50053 |
| PANTHER:PTHR10666 | PANTHER:PTHR10666:SF255 | InterPro:Ribosomal_L40e | InterPro:Ribosomal_zn-bd | SMART:SM00213 | SMART:SM01377 |
| SUPFAM:SSF54236 | SUPFAM:SSF57829 | UniParc:UPI000B4706FA | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS |
| InterPro:Ubiquitin_dom | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:536320690..536321738
Molecular Weight (calculated)
17221.2 Da
IEP (calculated)
10.866
GRAVY (calculated)
-0.597
Length
151 amino acids
Sequence
(BLAST)
(BLAST)
001: VTFTVEWERA VVRSAKMQIF VKTLTGKTIT LEVENSDTID NVKAKIQDKE GIPPNQQRLI FAGKQLEEGR TLADYNIQKE STLHLVLRLR GGSRGGRPVG
101: VPPNLLQLAL KYNEKRMICR KCYARLPARA TNCRKKKCGH SNELRPKKKF M
101: VPPNLLQLAL KYNEKRMICR KCYARLPARA TNCRKKKCGH SNELRPKKKF M
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGFGLL
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGFGLL
Arabidopsis Description
RUB1RUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.