Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G107010.1 | Barley | cytosol | 44.97 | 99.35 |
| HORVU7Hr1G103550.4 | Barley | cytosol | 67.16 | 99.13 |
| HORVU7Hr1G102840.1 | Barley | endoplasmic reticulum, extracellular, vacuole | 90.53 | 96.23 |
| HORVU4Hr1G040980.1 | Barley | cytosol | 14.2 | 96.0 |
| HORVU7Hr1G103160.4 | Barley | cytosol | 49.7 | 92.82 |
| HORVU6Hr1G016150.3 | Barley | cytosol | 52.37 | 91.71 |
| HORVU6Hr1G026200.5 | Barley | cytosol | 67.16 | 90.44 |
| HORVU0Hr1G038500.2 | Barley | cytosol | 57.69 | 80.58 |
| HORVU7Hr1G113500.1 | Barley | cytosol, extracellular | 36.39 | 80.39 |
| HORVU4Hr1G065100.3 | Barley | cytosol | 24.26 | 73.21 |
| HORVU4Hr1G001170.5 | Barley | cytosol | 23.37 | 71.82 |
| HORVU5Hr1G019590.12 | Barley | extracellular | 67.46 | 69.3 |
| HORVU7Hr1G029150.2 | Barley | cytosol | 34.91 | 64.84 |
| HORVU5Hr1G065170.1 | Barley | cytosol | 36.98 | 63.45 |
| HORVU7Hr1G029100.1 | Barley | cytosol | 35.21 | 62.3 |
| HORVU7Hr1G109650.2 | Barley | cytosol | 25.74 | 62.14 |
| HORVU7Hr1G029070.1 | Barley | cytosol | 34.32 | 61.7 |
| HORVU3Hr1G014180.3 | Barley | cytosol | 34.62 | 57.64 |
| HORVU3Hr1G014150.2 | Barley | cytosol | 34.62 | 57.64 |
| HORVU5Hr1G072680.1 | Barley | cytosol | 25.74 | 57.62 |
| HORVU5Hr1G019600.6 | Barley | cytosol | 31.36 | 56.38 |
| HORVU3Hr1G111000.1 | Barley | cytosol | 25.44 | 56.21 |
| HORVU4Hr1G061980.1 | Barley | cytosol | 19.82 | 55.83 |
| HORVU6Hr1G029050.1 | Barley | cytosol | 32.54 | 55.56 |
| HORVU1Hr1G023660.1 | Barley | extracellular | 28.4 | 53.63 |
| HORVU6Hr1G014970.1 | Barley | plastid | 36.98 | 52.08 |
| HORVU6Hr1G026260.1 | Barley | cytosol, extracellular, plasma membrane | 68.93 | 50.0 |
| HORVU6Hr1G014910.1 | Barley | cytosol | 23.96 | 49.39 |
| HORVU2Hr1G104410.26 | Barley | cytosol | 25.44 | 48.59 |
| HORVU7Hr1G103330.1 | Barley | cytosol | 56.21 | 48.35 |
| HORVU6Hr1G020140.6 | Barley | cytosol | 26.92 | 47.4 |
| HORVU5Hr1G056730.1 | Barley | cytosol, plastid | 22.19 | 44.64 |
| HORVU4Hr1G061900.2 | Barley | nucleus, plastid | 24.56 | 43.46 |
| HORVU7Hr1G103170.9 | Barley | cytosol, plasma membrane | 67.46 | 42.78 |
| HORVU7Hr1G103380.2 | Barley | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 18.64 | 40.65 |
| HORVU3Hr1G110900.1 | Barley | cytosol | 26.63 | 40.0 |
| HORVU1Hr1G087690.8 | Barley | nucleus | 30.18 | 38.06 |
| HORVU3Hr1G110970.1 | Barley | cytosol, nucleus, plastid | 28.7 | 33.11 |
| HORVU2Hr1G104440.1 | Barley | cytosol | 25.74 | 31.07 |
| HORVU4Hr1G089720.1 | Barley | nucleus | 34.02 | 29.04 |
| HORVU1Hr1G043930.8 | Barley | plastid | 28.11 | 22.57 |
| HORVU5Hr1G094230.2 | Barley | cytosol | 41.72 | 20.61 |
| HORVU6Hr1G026280.2 | Barley | plastid | 23.96 | 20.0 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G021700.4 | EnsemblPlantsGene:HORVU6Hr1G021700 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS | InterPro:Ubiquitin_dom | PANTHER:PTHR10666 |
| PANTHER:PTHR10666:SF242 | PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | ScanProsite:PS00299 | SMART:SM00213 |
| SUPFAM:SSF54236 | UniParc:UPI000B47FE9A | UniProt:A0A287TK43 | MapMan:19.2.2.1.1 | : | : |
Description
No Description!
Coordinates
chrchr6H:-:67351498..67353451
Molecular Weight (calculated)
37954.9 Da
IEP (calculated)
9.453
GRAVY (calculated)
-0.494
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: PLKSLKNEAN KSPTDLVSDQ LEARRILLPH RLKMQIFVKT LTGKTITLEV ESSDTIDNVK SKIQDKEGIP PDQQRLIFAG KQLEDGRTLA DYNIQKESTL
101: HLVLRLRGGM QIFVKTLTGK TITLEVESSD TIDNVKAKIQ DKEGIPPDQQ RLIFAGKQLE DGRTLADYNI QKESTLHLVL RLRGGMQIFV KTLTGKTITL
201: EVESSDTIDN VKAKIQDKEG IPPDQQRLIF AGKQLEDGRT LADYNIQKES TLHLVLRLRG GMQIFVKTLT GKTITLEVES SDTIDNVKAK IQDKEGIPPD
301: QQRLIFAGKQ LEDGRTLADY NIQKESTLHL VLRLRGGQ
101: HLVLRLRGGM QIFVKTLTGK TITLEVESSD TIDNVKAKIQ DKEGIPPDQQ RLIFAGKQLE DGRTLADYNI QKESTLHLVL RLRGGMQIFV KTLTGKTITL
201: EVESSDTIDN VKAKIQDKEG IPPDQQRLIF AGKQLEDGRT LADYNIQKES TLHLVLRLRG GMQIFVKTLT GKTITLEVES SDTIDNVKAK IQDKEGIPPD
301: QQRLIFAGKQ LEDGRTLADY NIQKESTLHL VLRLRGGQ
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG F
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG F
Arabidopsis Description
UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.