Factsheet for HORVU6Hr1G026280.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G040980.1	Barley	cytosol	10.12	82.0
HORVU7Hr1G103160.4	Barley	cytosol	23.21	51.93
HORVU7Hr1G113500.1	Barley	cytosol, extracellular	16.3	43.14
HORVU4Hr1G065100.3	Barley	cytosol	10.86	39.29
PGSC0003DMT400057275	Potato	cytosol	18.02	38.42
HORVU4Hr1G001170.5	Barley	cytosol	10.37	38.18
Solyc11g005650.1.1	Tomato	plasma membrane	10.37	37.17
Os06t0673500-01	Rice	cytosol	18.52	35.89
HORVU7Hr1G029150.2	Barley	cytosol	15.8	35.16
HORVU5Hr1G065170.1	Barley	cytosol	16.79	34.52
HORVU7Hr1G029070.1	Barley	cytosol	15.8	34.04
HORVU7Hr1G029100.1	Barley	cytosol	15.8	33.51
HORVU7Hr1G103550.4	Barley	cytosol	18.77	33.19
HORVU7Hr1G109650.2	Barley	cytosol	11.36	32.86
HORVU6Hr1G026200.5	Barley	cytosol	19.75	31.87
HORVU3Hr1G014180.3	Barley	cytosol	15.8	31.53
HORVU3Hr1G014150.2	Barley	cytosol	15.8	31.53
HORVU5Hr1G072680.1	Barley	cytosol	11.6	31.13
HORVU4Hr1G061980.1	Barley	cytosol	8.89	30.0
HORVU7Hr1G103380.2	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	11.36	29.68
HORVU6Hr1G016150.3	Barley	cytosol	13.58	28.5
HORVU1Hr1G023660.1	Barley	extracellular	12.59	28.49
HORVU6Hr1G029050.1	Barley	cytosol	13.09	26.77
HORVU6Hr1G014910.1	Barley	cytosol	10.62	26.22
HORVU2Hr1G104410.26	Barley	cytosol	11.36	25.99
HORVU4Hr1G061900.2	Barley	nucleus, plastid	12.1	25.65
HORVU7Hr1G102840.1	Barley	endoplasmic reticulum, extracellular, vacuole	20.0	25.47
HORVU7Hr1G103330.1	Barley	cytosol	24.2	24.94
HORVU6Hr1G014970.1	Barley	plastid	14.57	24.58
HORVU3Hr1G110900.1	Barley	cytosol	13.58	24.44
HORVU6Hr1G021700.4	Barley	cytosol	20.0	23.96
HORVU5Hr1G019590.12	Barley	extracellular	18.77	23.1
HORVU7Hr1G107010.1	Barley	cytosol	8.4	22.22
HORVU6Hr1G026260.1	Barley	cytosol, extracellular, plasma membrane	25.43	22.1
HORVU5Hr1G056730.1	Barley	cytosol, plastid	9.14	22.02
TraesCS7A01G027400.1	Wheat	cytosol	11.85	22.02
HORVU3Hr1G111000.1	Barley	cytosol	8.15	21.57
HORVU3Hr1G110970.1	Barley	cytosol, nucleus, plastid	15.56	21.5
HORVU6Hr1G020140.6	Barley	cytosol	9.14	19.27
HORVU7Hr1G103170.9	Barley	cytosol, plasma membrane	24.69	18.76
HORVU2Hr1G104440.1	Barley	cytosol	12.59	18.21
HORVU5Hr1G019600.6	Barley	cytosol	8.4	18.09
HORVU0Hr1G038500.2	Barley	cytosol	10.37	17.36
HORVU1Hr1G087690.8	Barley	nucleus	11.11	16.79
HORVU4Hr1G089720.1	Barley	nucleus	16.3	16.67
HORVU1Hr1G043930.8	Barley	plastid	14.57	14.01
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	12.1	13.35
HORVU5Hr1G094230.2	Barley	cytosol	9.63	5.7

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	UniProt:A0A287TNG9	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU6Hr1G026280	EnsemblPlants:HORVU6Hr1G026280.2	InterPro:IPR000626	PFAM:PF00240	PRINTS:PR00348
ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF240	SMART:SM00213	SUPFAM:SSF54236
UniParc:UPI000B487FC3	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	SEG:seg

Description

No Description!

Coordinates

chrchr6H:+:98546438..98549402

Molecular Weight (calculated)

14595.7 Da

IEP (calculated)

10.523

GRAVY (calculated)

-0.163

Length

405 amino acids

Sequence
(BLAST)

001: LPGTSKSPPN FVSDRLARSS NPPPRRLKMQ IFVXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
401: LRGGQ

Best Arabidopsis Sequence Match ( AT4G05050.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.