Factsheet for Os06t0673500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	36.36	98.7
HORVU4Hr1G040980.1	Barley	cytosol	23.45	98.0
TraesCS7B01G366400.1	Wheat	cytosol	35.89	97.4
TraesCS7D01G442900.1	Wheat	cytosol	69.86	95.42
EER89210	Sorghum	cytosol	35.89	94.94
TraesCS2A01G475100.1	Wheat	cytosol	34.93	94.81
CDY71299	Canola	cytosol	34.45	87.8
Bra033420.1-P	Field mustard	cytosol, nucleus, plastid	29.67	87.32
CDY23226	Canola	cytosol, nucleus, plastid	29.67	87.32
CDY71775	Canola	cytosol	34.45	86.75
TraesCS6B01G115100.1	Wheat	cytosol	66.99	80.0
TraesCS2D01G474700.1	Wheat	cytosol	29.19	79.22
CDX95544	Canola	cytosol	29.19	79.22
GSMUA_AchrUn_...	Banana	cytosol	34.93	78.49
Os09t0420800-01	Rice	cytosol, extracellular, plastid	57.42	78.43
Os06t0650100-01	Rice	cytosol, extracellular, plasma membrane	57.42	78.43
PGSC0003DMT400057275	Potato	cytosol	69.38	76.32
CDY70361	Canola	cytosol	35.89	71.43
TraesCS5A01G551700.1	Wheat	cytosol	48.8	63.75
Os09t0452700-00	Rice	cytosol, extracellular, plasma membrane, plastid	41.15	61.43
TraesCS7A01G466200.1	Wheat	cytosol	41.63	59.18
Os01t0328400-01	Rice	nucleus	43.06	58.06
Os05t0160200-01	Rice	nucleus	43.06	58.06
GSMUA_Achr8P07340_001	Banana	cytosol, plasma membrane	36.36	55.07
Solyc11g005640.1.1	Tomato	cytosol	57.42	54.05
Solyc11g005650.1.1	Tomato	plasma membrane	28.71	53.1
TraesCS7B01G044300.1	Wheat	cytosol	15.79	52.38
TraesCS6B01G140600.1	Wheat	cytosol	37.32	50.98
TraesCS2B01G426500.1	Wheat	cytosol	37.32	50.98
TraesCS5B01G080200.1	Wheat	cytosol	37.32	50.98
TraesCS7D01G466600.1	Wheat	cytosol	37.32	50.98
TraesCS6B01G164900.1	Wheat	cytosol	37.32	50.98
TraesCS7B01G381800.1	Wheat	cytosol	37.32	50.98
TraesCS6A01G112400.1	Wheat	cytosol	37.32	50.98
TraesCS7B01G367700.1	Wheat	cytosol	37.32	50.98
TraesCS6A01G136700.1	Wheat	cytosol	37.32	50.98
HORVU7Hr1G107010.1	Barley	cytosol	37.32	50.98
EES11473	Sorghum	cytosol	36.84	50.33
TraesCS7A01G453400.1	Wheat	cytosol	36.36	50.0
Bra009542.1-P	Field mustard	cytosol	52.63	47.83
AT5G37640.1	Thale cress	cytosol	72.73	47.2
TraesCS5A01G292600.1	Wheat	cytosol	37.32	45.88
TraesCS7A01G027400.1	Wheat	cytosol	46.89	44.95
TraesCS7B01G367600.1	Wheat	cytosol	62.2	43.19
Os10t0491801-00	Rice	cytosol	29.19	41.5
HORVU7Hr1G103380.2	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.62	41.29
Os04t0628100-01	Rice	plasma membrane	74.64	39.8
TraesCS6B01G012500.1	Wheat	cytosol	45.93	39.18
HORVU0Hr1G038500.2	Barley	cytosol	43.54	37.6
Os07t0489500-00	Rice	cytosol	42.58	35.04
AT4G05050.2	Thale cress	cytosol	37.32	34.06
CDY46367	Canola	cytosol	24.88	33.99
Bra029570.1-P	Field mustard	cytosol	24.88	33.99
KRH19844	Soybean	cytosol	37.32	33.91
Os02t0161900-01	Rice	extracellular, vacuole	76.56	33.06
TraesCSU01G125900.1	Wheat	cytosol	48.8	32.69
Os06t0681400-01	Rice	cytosol	76.56	28.78
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	48.33	27.52
HORVU6Hr1G026280.2	Barley	plastid	35.89	18.52
TraesCS5B01G386900.1	Wheat	cytosol	3.83	2.03

Protein Annotations

EnsemblPlants:Os06t0673500-01	EnsemblPlantsGene:Os06g0673500	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	PANTHER:PTHR10666
PANTHER:PTHR10666:SF242	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ProteinID:BAS99092.1	ScanProsite:PS00299
SMART:SM00213	SUPFAM:SSF54236	UniParc:UPI000393C260	UniProt:A0A0P0X0E0	MapMan:19.2.2.1.1	:

Description

Similar to polyubiquitin containing 7 ubiquitin monomers. (Os06t0673500-01)

Coordinates

chr6:-:27958671..27960089

Molecular Weight (calculated)

23427.3 Da

IEP (calculated)

9.944

GRAVY (calculated)

-0.379

Length

209 amino acids

Sequence
(BLAST)

001: HKSRNRCDLK QGGRSALAIF VKMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ
101: IFVKTLTGKT ITLAVESSDK IDNVKAKIQD KEGIPPDQQR LIFADKQLED GRTLADYNIQ KESTLHLVLR LRVAGRFRCF ATPGGRWLCA NEVCDGVSFK
201: FPFGFQSSS

Best Arabidopsis Sequence Match ( AT4G05050.3 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.