CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71775	Canola	cytosol	100.0	98.8
CDX95544	Canola	cytosol	80.49	85.71
CDY70361	Canola	cytosol	100.0	78.1
TraesCS7B01G044300.1	Wheat	cytosol	41.46	53.97
TraesCS7D01G466600.1	Wheat	cytosol	100.0	53.59
TraesCS6A01G136700.1	Wheat	cytosol	100.0	53.59
HORVU7Hr1G107010.1	Barley	cytosol	100.0	53.59
CDY23226	Canola	cytosol, nucleus, plastid	39.02	45.07
AT4G05050.2	Thale cress	cytosol	100.0	35.81
Bra029570.1-P	Field mustard	cytosol	65.85	35.29
CDY46367	Canola	cytosol	65.85	35.29
Os06t0673500-01	Rice	cytosol	87.8	34.45
CDY27155	Canola	cytosol	58.54	31.17
CDY12428	Canola	cytosol	58.54	31.17
CDX77550	Canola	cytosol	58.54	30.77
CDY50712	Canola	cytosol	58.54	30.77
CDY31710	Canola	cytosol	58.54	30.38
CDX84182	Canola	cytosol	58.54	30.19
CDY39163	Canola	cytosol	35.37	28.71
CDY29243	Canola	cytosol	69.51	23.08
CDX79728	Canola	cytosol	62.2	22.47
CDX79186	Canola	golgi, vacuole	19.51	9.82
CDX75065	Canola	cytosol	12.2	7.81
CDX75066	Canola	cytosol	12.2	7.81
CDX79660	Canola	cytosol	12.2	7.81
CDX95351	Canola	cytosol	12.2	7.81
CDX84576	Canola	cytosol	12.2	7.81
CDX78108	Canola	cytosol	12.2	7.81
CDX84153	Canola	cytosol	12.2	7.81
CDX73619	Canola	cytosol	12.2	7.75
CDY04715	Canola	cytosol	14.63	7.69
CDY12472	Canola	cytosol	14.63	7.69
CDY25783	Canola	cytosol	14.63	7.69
CDY44146	Canola	cytosol	14.63	7.69
CDX76623	Canola	cytosol	14.63	7.64
CDX67885	Canola	cytosol	14.63	7.64
CDY66301	Canola	cytosol	14.63	7.64
CDY50916	Canola	cytosol	14.63	7.64
CDY25100	Canola	cytosol	14.63	7.64
CDY11410	Canola	cytosol	14.63	7.64
CDX93983	Canola	cytosol	14.63	7.64
CDX83344	Canola	cytosol	14.63	7.64
CDY00254	Canola	cytosol	7.32	5.66
TraesCS5B01G386900.1	Wheat	cytosol	6.1	1.27

Protein Annotations

Gene3D:3.10.20.90	MapMan:35.1	UniProt:A0A078JX72	EnsemblPlants:CDY71299	ProteinID:CDY71299	ProteinID:CDY71299.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00014015001	InterPro:IPR000626	PFAM:PF00240
PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF240	SMART:SM00213
SUPFAM:SSF54236	UniParc:UPI0004EEA244	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom

Description

BnaA08g30590DBnaA08g30590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JX72]

Coordinates

chrLK045292:-:3..654

Molecular Weight (calculated)

9272.3 Da

IEP (calculated)

9.094

GRAVY (calculated)

-0.339

Length

82 amino acids

Sequence
(BLAST)

1: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VK

Best Arabidopsis Sequence Match ( AT4G05050.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.