CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029570.1-P	Field mustard	cytosol	100.0	100.0
TraesCS7B01G044300.1	Wheat	cytosol	40.52	98.41
TraesCS7D01G466600.1	Wheat	cytosol	81.05	81.05
TraesCS6A01G136700.1	Wheat	cytosol	81.05	81.05
HORVU7Hr1G107010.1	Barley	cytosol	81.05	81.05
CDY70361	Canola	cytosol	49.67	72.38
CDY71775	Canola	cytosol	35.95	66.27
CDY71299	Canola	cytosol	35.29	65.85
AT4G05050.2	Thale cress	cytosol	81.05	54.15
CDX95544	Canola	cytosol	24.84	49.35
CDY23226	Canola	cytosol, nucleus, plastid	18.3	39.44
CDY39163	Canola	cytosol	25.49	38.61
CDY29243	Canola	cytosol	54.9	34.01
Os06t0673500-01	Rice	cytosol	33.99	24.88
CDX79728	Canola	cytosol	34.64	23.35
CDY12428	Canola	cytosol	22.22	22.08
CDY27155	Canola	cytosol	22.22	22.08
CDX77550	Canola	cytosol	22.22	21.79
CDY50712	Canola	cytosol	22.22	21.79
CDY31710	Canola	cytosol	22.22	21.52
CDX84182	Canola	cytosol	22.22	21.38
CDX76623	Canola	cytosol	13.73	13.38
CDX67885	Canola	cytosol	13.73	13.38
CDY66301	Canola	cytosol	13.73	13.38
CDY50916	Canola	cytosol	13.73	13.38
CDY25100	Canola	cytosol	13.73	13.38
CDX83344	Canola	cytosol	13.73	13.38
CDX93983	Canola	cytosol	13.73	13.38
CDY11410	Canola	cytosol	13.73	13.38
CDY25783	Canola	cytosol	11.11	10.9
CDY44146	Canola	cytosol	11.11	10.9
CDY04715	Canola	cytosol	11.11	10.9
CDY12472	Canola	cytosol	11.11	10.9
CDX79660	Canola	cytosol	7.19	8.59
CDX95351	Canola	cytosol	7.19	8.59
CDX78108	Canola	cytosol	7.19	8.59
CDX75065	Canola	cytosol	7.19	8.59
CDX84576	Canola	cytosol	7.19	8.59
CDX84153	Canola	cytosol	7.19	8.59
CDX75066	Canola	cytosol	7.19	8.59
CDX73619	Canola	cytosol	7.19	8.53
CDX79186	Canola	golgi, vacuole	8.5	7.98
CDY00254	Canola	cytosol	2.61	3.77
TraesCS5B01G386900.1	Wheat	cytosol	3.27	1.27

Protein Annotations

MapMan:19.2.2.1.1	Gene3D:3.10.20.90	UniProt:A0A078I8E7	EnsemblPlants:CDY46367	ProteinID:CDY46367	ProteinID:CDY46367.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00083816001	InterPro:IPR000626	PFAM:PF00240
PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR10666	PANTHER:PTHR10666:SF242	SMART:SM00213
SUPFAM:SSF54236	UniParc:UPI000023154D	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom

Description

BnaA09g19810DBnaA09g19810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8E7]

Coordinates

chrLK032664:-:63192..64507

Molecular Weight (calculated)

17179.8 Da

IEP (calculated)

7.686

GRAVY (calculated)

-0.424

Length

153 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGF

Best Arabidopsis Sequence Match ( AT4G05050.3 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.