Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G551700.1 | Wheat | cytosol | 50.32 | 98.12 |
| TraesCSU01G019400.1 | Wheat | cytosol | 33.01 | 66.45 |
| Bra033420.1-P | Field mustard | cytosol, nucleus, plastid | 14.74 | 64.79 |
| CDY23226 | Canola | cytosol, nucleus, plastid | 14.74 | 64.79 |
| TraesCS6B01G012500.1 | Wheat | cytosol | 47.44 | 60.41 |
| PGSC0003DMT400057275 | Potato | cytosol | 32.05 | 52.63 |
| Os06t0673500-01 | Rice | cytosol | 32.69 | 48.8 |
| TraesCSU01G094900.1 | Wheat | cytosol | 22.44 | 46.98 |
| TraesCSU01G095200.1 | Wheat | cytosol | 21.47 | 46.85 |
| TraesCSU01G018500.1 | Wheat | cytosol | 27.88 | 43.72 |
| TraesCSU01G018900.1 | Wheat | endoplasmic reticulum, extracellular | 33.33 | 41.6 |
| Solyc11g005640.1.1 | Tomato | cytosol | 26.28 | 36.94 |
| TraesCSU01G095100.1 | Wheat | cytosol | 22.12 | 28.63 |
| TraesCSU01G035100.1 | Wheat | nucleus | 22.44 | 20.23 |
| TraesCSU01G124300.1 | Wheat | cytosol | 18.91 | 19.67 |
| TraesCSU01G140400.1 | Wheat | nucleus | 21.15 | 16.75 |
Protein Annotations
| EnsemblPlants:TraesCSU01G125900.1 | EnsemblPlantsGene:TraesCSU01G125900 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | PANTHER:PTHR45095 | PANTHER:PTHR45095:SF2 |
| PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | SMART:SM00213 | SUPFAM:SSF54236 | MapMan:35.1 |
Description
No Description!
Coordinates
chrUn:+:108721387..108722325
Molecular Weight (calculated)
35472.4 Da
IEP (calculated)
7.990
GRAVY (calculated)
-0.378
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIFVKTFTG RTVTLNVESS DTIGNVKAKI HHKEDFQPYQ QCLIFSGKRL EDGRTLADYG IQKGVTLHSE PRFPGHIKIS VRSLNGKMMT SQVHPSDTIG
101: AMKAMFLFEH HLIFNGKQLE ETRTFADYDI QDGSTLDDFR LHAGMKININ VLDNPLYVES SDTIDSVKAK INDEYGIPLA QQRLEFHRIR RTSGFHPYSI
201: LQGIRTLADY NIQNGATLDL IVCHRPRPMQ IFVKNLGGKT LTFNVQSSDT IRSVKEKIQQ VDGIDPASQR LIFSGWQLED SFTLAEYNIQ HESTFHLCLR
301: LYSCAKCPGT HH
101: AMKAMFLFEH HLIFNGKQLE ETRTFADYDI QDGSTLDDFR LHAGMKININ VLDNPLYVES SDTIDSVKAK INDEYGIPLA QQRLEFHRIR RTSGFHPYSI
201: LQGIRTLADY NIQNGATLDL IVCHRPRPMQ IFVKNLGGKT LTFNVQSSDT IRSVKEKIQQ VDGIDPASQR LIFSGWQLED SFTLAEYNIQ HESTFHLCLR
301: LYSCAKCPGT HH
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGF
Arabidopsis Description
UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.