Factsheet for Os06t0681400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01965	Sorghum	cytosol	54.68	99.67
TraesCS7A01G453300.1	Wheat	cytosol	54.5	99.67
TraesCSU01G019400.1	Wheat	cytosol	27.34	98.06
Zm00001d053834_P002	Maize	cytosol, plastid	67.09	97.9
Os02t0161900-01	Rice	extracellular, vacuole	83.09	95.45
Os04t0628100-01	Rice	plasma membrane	67.09	95.15
AT1G55060.1	Thale cress	cytosol	38.85	93.91
HORVU6Hr1G016150.3	Barley	cytosol	32.01	92.23
TraesCSU01G018900.1	Wheat	endoplasmic reticulum, extracellular	41.37	92.0
Os06t0650100-01	Rice	cytosol, extracellular, plasma membrane	22.3	81.05
Os09t0420800-01	Rice	cytosol, extracellular, plastid	22.3	81.05
Os06t0673500-01	Rice	cytosol	28.78	76.56
KRG91230	Soybean	cytosol	41.01	74.75
TraesCS7B01G354100.1	Wheat	cytosol	41.01	74.75
Os09t0452700-00	Rice	cytosol, extracellular, plasma membrane, plastid	16.01	63.57
Os05t0160200-01	Rice	nucleus	17.27	61.94
Os01t0328400-01	Rice	nucleus	17.09	61.29
Os10t0491801-00	Rice	cytosol	11.51	43.54
Os07t0489500-00	Rice	cytosol	17.63	38.58

Protein Annotations

EnsemblPlants:Os06t0681400-01	EnsemblPlantsGene:Os06g0681400	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	PANTHER:PTHR10666
PANTHER:PTHR10666:SF240	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ProteinID:BAS99152.1	ScanProsite:PS00299
SMART:SM00213	SUPFAM:SSF54236	UniParc:UPI0003938748	UniProt:A0A0P0X005	MapMan:19.2.2.1.1	:

Description

Ubiquitin1, polyubiquitinUbiquitin domain containing protein. (Os06t0681400-01)

Coordinates

chr6:+:28401740..28404496

Molecular Weight (calculated)

62429.5 Da

IEP (calculated)

9.395

GRAVY (calculated)

-0.500

Length

556 amino acids

Sequence
(BLAST)

001: IEPQNRREKK ISPRSEASNR LLKMQIFVKT LTGKTITLEV ESSDTIDNVK AKIQDKEGIP PDQQRLIFAG KQLEDGRTLA DYNIQKESTL HLVLRLRGGM
101: QIFVKTLTGK TITLEVESSD TIDNVKAKIQ DKEGIPPDQQ RLIFAGKQLE DGRTLADYNI QKESTLHLVL RLRGGMQIFV KTLTGKTITL EVESSDTIDN
201: VKAKIQDKEG IPPDQQRLIF AGKQLEDGRT LADYNIQKES TLHLVLRLRG GMQIFVKTLT GKTITLEVES SDTIDNVKAK IQDKEGIPPD QQRLIFAGKQ
301: LEDGRTLADY NIQKESTLHL VLRLRGGMQI FVKTLTGKTI TLEVESSDTI DNVKAKIQDK EGIPPDQQRL IFAGKQLEDG RTLADYNIQK ESTLHLVLRL
401: RGGMQIFVKT LTGKTITLEV ESSDTIDNVK AKIQDKEGIP PDQQRLIFAG KQLEDGRTLA DYNIQKESTL HLVLRLRGGM QIFVKTLTGK TITLEVESSD
501: TIDNVKAKIQ DKEGIPPDQQ RLIFAGKQLE DGRTLADYNI QKESTLHLVL RLRGGQ

Best Arabidopsis Sequence Match ( AT4G05320.2 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS
401: DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGF

Arabidopsis Description

UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.