CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19455	Soybean	cytosol	100.0	100.0
KRH35592	Soybean	cytosol	100.0	100.0
TraesCSU01G019400.1	Wheat	cytosol	49.84	98.06
AT1G55060.1	Thale cress	cytosol	70.49	93.48
HORVU6Hr1G016150.3	Barley	cytosol	58.03	91.71
KRH02501	Soybean	cytosol	45.9	91.5
TraesCSU01G018900.1	Wheat	endoplasmic reticulum, extracellular	74.75	91.2
KRH13718	Soybean	cytosol, endoplasmic reticulum, nucleus	40.33	79.87
KRH43738	Soybean	cytosol	40.33	79.87
TraesCS7A01G453300.1	Wheat	cytosol	74.75	75.0
EES01965	Sorghum	cytosol	74.75	74.75
TraesCS7B01G354100.1	Wheat	cytosol	74.75	74.75
KRH32433	Soybean	cytosol, endoplasmic reticulum	74.75	74.51
KRG96204	Soybean	cytosol	29.51	70.31
KRH53585	Soybean	cytosol	29.51	70.31
KRH64348	Soybean	cytosol, endoplasmic reticulum	29.51	70.31
KRH67947	Soybean	cytosol	29.51	70.31
KRH38035	Soybean	cytosol	29.84	70.0
KRH19844	Soybean	cytosol	49.84	66.09
KRH69588	Soybean	nucleus	31.48	61.94
KRH74571	Soybean	cytosol	31.48	61.94
KRH11776	Soybean	nucleus	31.48	61.94
KRH36782	Soybean	nucleus	31.15	61.29
KRH19453	Soybean	cytosol	74.75	59.84
KRH02499	Soybean	cytosol	74.75	59.84
KRG99541	Soybean	cytosol	21.31	58.56
Zm00001d053834_P002	Maize	cytosol, plastid	72.46	58.01
KRH20404	Soybean	cytosol	75.08	50.11
KRH50099	Soybean	cytosol, endoplasmic reticulum, nucleus	74.75	42.78
KRH20401	Soybean	cytosol	74.75	42.78
Os06t0681400-01	Rice	cytosol	74.75	41.01

Protein Annotations

EntrezGene:100791065	EntrezGene:100799042	MapMan:19.2.2.1.1	Gene3D:3.10.20.90	ProteinID:BAA03764.1	ProteinID:BAA05085.1
ProteinID:BAA05670.1	EnsemblPlantsGene:GLYMA_20G141600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005773	InterPro:IPR000626
EnsemblPlants:KRG91230	ProteinID:KRG91230	ProteinID:KRG91230.1	ProteinID:KRH19452.1	ProteinID:KRH19454.1	ProteinID:KRH19455.1
ProteinID:KRH35591.1	ProteinID:KRH35592.1	UniProt:P69325	PFAM:PF00240	PRINTS:PR00348	ScanProsite:PS00299
PFscan:PS50053	PANTHER:PTHR45095	PANTHER:PTHR45095:SF2	UniProt:Q9S7H2	SMART:SM00213	SUPFAM:SSF54236
UniParc:UPI0000000794	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	EMBL:X13251

Description

SUBI-1hypothetical protein

Coordinates

chr20:+:38033121..38035421

Molecular Weight (calculated)

34194.4 Da

IEP (calculated)

7.816

GRAVY (calculated)

-0.434

Length

305 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGF

Best Arabidopsis Sequence Match ( AT4G02890.3 )
(BLAST)

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.