Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G087100.1 | Wheat | cytosol | 40.7 | 81.22 |
| TraesCS6B01G164600.1 | Wheat | cytosol | 40.7 | 81.22 |
| TraesCS2D01G405500.1 | Wheat | cytosol | 40.04 | 80.26 |
| KRG91230 | Soybean | cytosol | 50.11 | 75.08 |
| KRH35592 | Soybean | cytosol | 50.11 | 75.08 |
| KRH19455 | Soybean | cytosol | 50.11 | 75.08 |
| HORVU5Hr1G019590.12 | Barley | extracellular | 51.86 | 72.04 |
| KRH50099 | Soybean | cytosol, endoplasmic reticulum, nucleus | 83.15 | 71.29 |
| TraesCS2A01G408200.1 | Wheat | cytosol | 25.38 | 71.17 |
| KRH20401 | Soybean | cytosol | 82.93 | 71.11 |
| Zm00001d015327_P001 | Maize | cytosol | 82.49 | 70.73 |
| Os02t0161900-01 | Rice | extracellular, vacuole | 74.62 | 70.45 |
| AT1G65350.1 | Thale cress | cytosol | 49.02 | 70.22 |
| KRG96204 | Soybean | cytosol | 18.82 | 67.19 |
| KRH53585 | Soybean | cytosol | 18.82 | 67.19 |
| KRH64348 | Soybean | cytosol, endoplasmic reticulum | 18.82 | 67.19 |
| KRH67947 | Soybean | cytosol | 18.82 | 67.19 |
| KRH02501 | Soybean | cytosol | 22.1 | 66.01 |
| KRH13718 | Soybean | cytosol, endoplasmic reticulum, nucleus | 21.44 | 63.64 |
| KRH43738 | Soybean | cytosol | 21.44 | 63.64 |
| KRH32433 | Soybean | cytosol, endoplasmic reticulum | 40.7 | 60.78 |
| KRH11776 | Soybean | nucleus | 20.57 | 60.65 |
| KRH74571 | Soybean | cytosol | 20.57 | 60.65 |
| KRH69588 | Soybean | nucleus | 20.57 | 60.65 |
| KRH36782 | Soybean | nucleus | 20.35 | 60.0 |
| KXG29523 | Sorghum | cytosol | 49.89 | 59.84 |
| KRH02499 | Soybean | cytosol | 46.83 | 56.17 |
| KRG99541 | Soybean | cytosol | 13.57 | 55.86 |
| KRH38035 | Soybean | cytosol | 14.66 | 51.54 |
| Solyc07g064130.1.1 | Tomato | nucleus | 49.89 | 49.89 |
| VIT_19s0177g00070.t01 | Wine grape | cytosol | 49.89 | 49.89 |
| EES05681 | Sorghum | cytosol | 49.89 | 49.67 |
| PGSC0003DMT400027156 | Potato | cytosol | 40.7 | 48.82 |
| KRH19453 | Soybean | cytosol | 40.7 | 48.82 |
| KRH19844 | Soybean | cytosol | 24.07 | 47.83 |
Protein Annotations
| MapMan:19.2.2.1.1 | Gene3D:3.10.20.90 | EMBL:ACUP02008262 | EnsemblPlantsGene:GLYMA_13G176400 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | UniProt:I1M077 | InterPro:IPR000626 | EnsemblPlants:KRH20404 | ProteinID:KRH20404 | ProteinID:KRH20404.1 |
| PFAM:PF00240 | PRINTS:PR00348 | ScanProsite:PS00299 | PFscan:PS50053 | PANTHER:PTHR45095 | PANTHER:PTHR45095:SF2 |
| SMART:SM00213 | SUPFAM:SSF54236 | UniParc:UPI000233B7DD | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS |
| InterPro:Ubiquitin_dom | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:29058518..29061005
Molecular Weight (calculated)
51224.9 Da
IEP (calculated)
7.882
GRAVY (calculated)
-0.443
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIFVKTLTG KTITLEVESS DTIDNVKSKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS
401: DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS
401: DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGF
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS
401: DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGF
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS
401: DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGF
Arabidopsis Description
UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.