Factsheet for TraesCS2D01G405500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	33.33	98.7
TraesCS6B01G164600.1	Wheat	cytosol	98.68	98.25
TraesCS6D01G109600.1	Wheat	cytosol	98.68	98.25
TraesCS7D01G443100.1	Wheat	cytosol	98.25	97.82
TraesCS6D01G248600.1	Wheat	cytosol	65.79	97.4
TraesCS7D01G442900.1	Wheat	cytosol	65.35	97.39
TraesCS7D01G466600.1	Wheat	cytosol	65.35	97.39
TraesCS2A01G408200.1	Wheat	cytosol	68.86	96.32
TraesCS6A01G087100.1	Wheat	cytosol	96.05	95.63
TraesCS7D01G453100.1	Wheat	cytosol	62.72	92.26
TraesCS2D01G474700.1	Wheat	cytosol	28.07	83.12
TraesCS5D01G231400.1	Wheat	cytosol	53.51	79.74
TraesCS7D01G494400.1	Wheat	cytosol	53.51	79.74
TraesCS6D01G136800.1	Wheat	cytosol	48.68	76.55
TraesCS7D01G143000.1	Wheat	cytosol	51.75	76.13
TraesCS1D01G206100.1	Wheat	cytosol	50.88	74.84
TraesCS7D01G442700.1	Wheat	cytosol, nucleus	98.68	73.77
TraesCS1D01G206400.1	Wheat	cytosol	49.56	72.9
TraesCS4D01G218300.1	Wheat	cytosol	37.28	69.11
AT1G65350.1	Thale cress	cytosol	96.05	68.65
TraesCS4D01G006900.1	Wheat	cytosol	38.6	68.22
HORVU5Hr1G019590.12	Barley	extracellular	98.25	68.09
TraesCS5D01G269800.1	Wheat	cytosol	38.16	64.44
TraesCS6D01G137400.1	Wheat	cytosol	37.28	62.96
TraesCS7D01G474200.1	Wheat	cytosol	38.16	62.59
TraesCS7D01G474300.1	Wheat	cytosol	37.72	61.87
TraesCS1D01G109800.1	Wheat	cytosol	41.67	61.29
TraesCS1D01G405400.1	Wheat	cytosol	41.67	61.29
TraesCS2D01G458600.1	Wheat	cytosol	37.72	60.56
TraesCS1D01G228700.1	Wheat	cytosol	36.84	60.43
TraesCS2D01G458700.1	Wheat	cytosol	37.28	59.86
TraesCS6D01G125600.1	Wheat	cytosol	86.4	59.7
KXG29523	Sorghum	cytosol	98.25	58.79
PGSC0003DMT400027156	Potato	cytosol	98.25	58.79
TraesCS4D01G218400.1	Wheat	cytosol	38.16	57.62
TraesCS2D01G580700.1	Wheat	cytosol	35.09	57.55
TraesCS1D01G174700.1	Wheat	cytosol	40.79	57.41
TraesCS4D01G234300.1	Wheat	cytosol	38.6	55.7
TraesCS2D01G459200.1	Wheat	cytosol	33.33	55.07
TraesCS2D01G459100.1	Wheat	cytosol	33.33	55.07
TraesCS2D01G459000.1	Wheat	cytosol	32.89	54.35
TraesCS5D01G194700.1	Wheat	cytosol	32.46	51.75
TraesCS3D01G510800.1	Wheat	cytosol	48.25	49.11
TraesCS3D01G510600.1	Wheat	cytosol	48.25	49.11
VIT_19s0177g00070.t01	Wine grape	cytosol	98.25	49.02
EES05681	Sorghum	cytosol	98.25	48.8
Solyc07g064130.1.1	Tomato	nucleus	97.81	48.8
TraesCS1D01G427100.1	Wheat	cytosol	47.81	48.02
TraesCS3D01G510400.1	Wheat	mitochondrion	46.49	47.32
Os02t0161900-01	Rice	extracellular, vacuole	98.25	46.28
TraesCS2D01G092300.1	Wheat	cytosol	28.51	44.52
TraesCS5D01G391800.1	Wheat	mitochondrion	54.82	43.1
TraesCS2D01G092200.1	Wheat	cytosol	28.95	42.86
Zm00001d015327_P001	Maize	cytosol	100.0	42.78
TraesCS5D01G087500.1	Wheat	cytosol	42.11	41.92
TraesCS3D01G511200.1	Wheat	cytosol	40.79	41.89
KRH20404	Soybean	cytosol	80.26	40.04
TraesCS3D01G039700.1	Wheat	cytosol	37.28	37.61
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	59.21	36.78
TraesCS3D01G510200.1	Wheat	cytosol	35.53	36.0
TraesCS7D01G100100.1	Wheat	cytosol	37.72	35.83
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	46.49	35.81
KRH50099	Soybean	cytosol, endoplasmic reticulum, nucleus	80.26	34.33
KRH20401	Soybean	cytosol	80.26	34.33
TraesCS3D01G510900.1	Wheat	nucleus	44.74	34.23
TraesCS3D01G511000.1	Wheat	cytosol	44.3	34.12
TraesCS3D01G510300.2	Wheat	nucleus	43.42	33.33
TraesCS3D01G511900.1	Wheat	mitochondrion	47.81	33.03
TraesCS3D01G511500.1	Wheat	nucleus	42.54	32.44
TraesCS3D01G510500.1	Wheat	mitochondrion	13.16	26.32
TraesCS1D01G314000.1	Wheat	cytosol	51.75	20.0

Protein Annotations

EnsemblPlants:TraesCS2D01G405500.1	EnsemblPlantsGene:TraesCS2D01G405500	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	ncoils:Coil
PANTHER:PTHR45095	PANTHER:PTHR45095:SF2	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ScanProsite:PS00299
SMART:SM00213	SUPFAM:SSF54236	TIGR:cd01803	MapMan:19.2.2.1.1	:	:

Description

No Description!

Coordinates

chr2D:-:520582836..520583523

Molecular Weight (calculated)

25554.9 Da

IEP (calculated)

7.764

GRAVY (calculated)

-0.477

Length

228 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRIF AGKQLEDGRT LADYNIQKES TLHLVLRLRG GMQIFVKTLT GKTITLEVES SDTIDNVKAK IQDKEGIPPD QQRLIFAGKQ
201: LEDGRTLADY NIQKESTLHL VLRLRGGQ

Best Arabidopsis Sequence Match ( AT4G02890.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.