Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G241200.1 | Wheat | cytosol | 95.68 | 95.68 |
| TraesCS7D01G454100.1 | Wheat | cytosol, golgi, unclear | 51.8 | 93.51 |
| TraesCS5D01G269800.1 | Wheat | cytosol | 85.61 | 88.15 |
| TraesCS4D01G006900.1 | Wheat | cytosol | 77.7 | 83.72 |
| TraesCS6D01G137400.1 | Wheat | cytosol | 81.3 | 83.7 |
| TraesCS7D01G474200.1 | Wheat | cytosol | 83.45 | 83.45 |
| TraesCS2D01G458600.1 | Wheat | cytosol | 84.89 | 83.1 |
| TraesCS7D01G474300.1 | Wheat | cytosol | 82.73 | 82.73 |
| TraesCS2D01G458700.1 | Wheat | cytosol | 83.45 | 81.69 |
| TraesCS4D01G218300.1 | Wheat | cytosol | 71.22 | 80.49 |
| TraesCS1A01G227100.1 | Wheat | cytosol | 96.4 | 79.29 |
| HORVU5Hr1G072680.1 | Barley | cytosol | 83.45 | 76.82 |
| EER97248 | Sorghum | cytosol | 74.82 | 76.47 |
| EER97249 | Sorghum | cytosol | 76.98 | 75.89 |
| KXG35893 | Sorghum | cytosol | 76.26 | 74.65 |
| TraesCS2D01G580700.1 | Wheat | cytosol | 72.66 | 72.66 |
| OQU89356 | Sorghum | cytosol | 71.22 | 71.22 |
| TraesCS2D01G459000.1 | Wheat | cytosol | 69.78 | 70.29 |
| TraesCS4D01G218400.1 | Wheat | cytosol | 76.26 | 70.2 |
| TraesCS2D01G459100.1 | Wheat | cytosol | 69.06 | 69.57 |
| TraesCS2D01G459200.1 | Wheat | cytosol | 68.35 | 68.84 |
| TraesCS4D01G234300.1 | Wheat | cytosol | 77.7 | 68.35 |
| TraesCS5D01G194700.1 | Wheat | cytosol | 69.06 | 67.13 |
| TraesCS2D01G092300.1 | Wheat | cytosol | 61.87 | 58.9 |
| TraesCS2D01G092200.1 | Wheat | cytosol | 63.31 | 57.14 |
| TraesCS1D01G109800.1 | Wheat | cytosol | 58.99 | 52.9 |
| TraesCS1D01G405400.1 | Wheat | cytosol | 58.99 | 52.9 |
| TraesCS7D01G442900.1 | Wheat | cytosol | 56.83 | 51.63 |
| TraesCS6D01G248600.1 | Wheat | cytosol | 56.83 | 51.3 |
| TraesCS5D01G231400.1 | Wheat | cytosol | 54.68 | 49.67 |
| TraesCS7D01G494400.1 | Wheat | cytosol | 54.68 | 49.67 |
| TraesCS1D01G174700.1 | Wheat | cytosol | 57.55 | 49.38 |
| TraesCS7D01G453100.1 | Wheat | cytosol | 54.68 | 49.03 |
| TraesCS7D01G143000.1 | Wheat | cytosol | 53.96 | 48.39 |
| TraesCS1D01G206100.1 | Wheat | cytosol | 52.52 | 47.1 |
| TraesCS6D01G136800.1 | Wheat | cytosol | 48.2 | 46.21 |
| TraesCS1D01G206400.1 | Wheat | cytosol | 50.36 | 45.16 |
| Os07t0489500-00 | Rice | cytosol | 77.7 | 42.52 |
| TraesCS2D01G405500.1 | Wheat | cytosol | 60.43 | 36.84 |
| TraesCS6D01G109600.1 | Wheat | cytosol | 60.43 | 36.68 |
| TraesCS7D01G443100.1 | Wheat | cytosol | 59.71 | 36.24 |
| TraesCS7D01G442700.1 | Wheat | cytosol, nucleus | 60.43 | 27.54 |
| TraesCS3D01G510400.1 | Wheat | mitochondrion | 41.73 | 25.89 |
| TraesCS3D01G510800.1 | Wheat | cytosol | 41.73 | 25.89 |
| TraesCS3D01G510500.1 | Wheat | mitochondrion | 20.86 | 25.44 |
| TraesCS6D01G125600.1 | Wheat | cytosol | 59.71 | 25.15 |
| TraesCS3D01G510600.1 | Wheat | cytosol | 39.57 | 24.55 |
| TraesCS1D01G427100.1 | Wheat | cytosol | 36.69 | 22.47 |
| TraesCS3D01G511200.1 | Wheat | cytosol | 34.53 | 21.62 |
| TraesCS3D01G039700.1 | Wheat | cytosol | 32.37 | 19.91 |
| TraesCS3D01G511000.1 | Wheat | cytosol | 40.29 | 18.92 |
| TraesCS3D01G510700.1 | Wheat | cytosol, nucleus, plastid | 39.57 | 18.58 |
| TraesCS3D01G510300.2 | Wheat | nucleus | 39.57 | 18.52 |
| TraesCS3D01G510200.1 | Wheat | cytosol | 29.5 | 18.22 |
| TraesCS3D01G510900.1 | Wheat | nucleus | 38.85 | 18.12 |
| TraesCS3D01G511500.1 | Wheat | nucleus | 38.85 | 18.06 |
| TraesCS7D01G100100.1 | Wheat | cytosol | 30.94 | 17.92 |
| TraesCS3D01G511900.1 | Wheat | mitochondrion | 39.57 | 16.67 |
| TraesCS5D01G391800.1 | Wheat | mitochondrion | 32.37 | 15.52 |
| TraesCS7D01G024600.1 | Wheat | cytosol, mitochondrion | 40.29 | 15.26 |
| TraesCS5D01G087500.1 | Wheat | cytosol | 19.42 | 11.79 |
| TraesCS1D01G314000.1 | Wheat | cytosol | 38.85 | 9.15 |
| TraesCS7D01G466600.1 | Wheat | cytosol | 8.63 | 7.84 |
| TraesCS2D01G474700.1 | Wheat | cytosol | 4.32 | 7.79 |
Protein Annotations
| MapMan:17.1.2.1.43 | Gene3D:2.20.28.70 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | InterPro:IPR000626 | InterPro:IPR038587 | InterPro:L40e_sf | PFAM:PF00240 | PFAM:PF01020 |
| PRINTS:PR00348 | PFscan:PS50053 | PANTHER:PTHR10666 | PANTHER:PTHR10666:SF255 | InterPro:Ribosomal_L40e | InterPro:Ribosomal_zn-bd |
| SMART:SM00213 | SMART:SM01377 | SUPFAM:SSF54236 | SUPFAM:SSF57829 | EnsemblPlantsGene:TraesCS1D01G228700 | EnsemblPlants:TraesCS1D01G228700.1 |
| InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | TIGR:cd01803 | SEG:seg | : |
Description
No Description!
Coordinates
chr1D:+:316678435..316679211
Molecular Weight (calculated)
16028.7 Da
IEP (calculated)
10.625
GRAVY (calculated)
-0.699
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIFLKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAEKQL EEGRTLANYN IQKESTLHLV LRLRGGTRGG YLNVEPNLLQ LALKYNEKKM
101: VCRKCYARLP LRSTNCRKKK CGHSNQIRPK KRFINKLSN
101: VCRKCYARLP LRSTNCRKKK CGHSNQIRPK KRFINKLSN
001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGTMIK VKTLTGKEIE IDIEPTDTID
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGFGLL
101: RIKERVEEKE GIPPVQQRLI YAGKQLADDK TAKDYNIEGG SVLHLVLALR GGFGLL
Arabidopsis Description
RUB1RUB1 [Source:UniProtKB/TrEMBL;Acc:A0A178W1F2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.