Factsheet for TraesCS7D01G443100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G466600.1	Wheat	cytosol	66.81	100.0
TraesCS6D01G109600.1	Wheat	cytosol	99.56	99.56
TraesCS2D01G405500.1	Wheat	cytosol	97.82	98.25
TraesCS6D01G248600.1	Wheat	cytosol	65.94	98.05
TraesCS7D01G442900.1	Wheat	cytosol	65.5	98.04
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	32.75	97.4
TraesCS7B01G366600.1	Wheat	cytosol	65.94	96.79
TraesCS2A01G408500.1	Wheat	cytosol	96.51	96.51
TraesCS7D01G453100.1	Wheat	cytosol	62.88	92.9
CDY39163	Canola	cytosol	39.74	90.1
TraesCS2D01G474700.1	Wheat	cytosol	28.82	85.71
TraesCS7D01G494400.1	Wheat	cytosol	53.71	80.39
TraesCS5D01G231400.1	Wheat	cytosol	53.71	80.39
TraesCS6D01G136800.1	Wheat	cytosol	48.91	77.24
TraesCS7D01G143000.1	Wheat	cytosol	51.97	76.77
TraesCS1D01G206100.1	Wheat	cytosol	51.09	75.48
TraesCS7D01G442700.1	Wheat	cytosol, nucleus	99.56	74.75
TraesCS1D01G206400.1	Wheat	cytosol	49.78	73.55
TraesCS4D01G218300.1	Wheat	cytosol	37.12	69.11
TraesCS4D01G006900.1	Wheat	cytosol	37.99	67.44
TraesCS5D01G269800.1	Wheat	cytosol	37.55	63.7
TraesCS6D01G137400.1	Wheat	cytosol	36.68	62.22
TraesCS7D01G474200.1	Wheat	cytosol	37.55	61.87
TraesCS1D01G109800.1	Wheat	cytosol	41.48	61.29
TraesCS1D01G405400.1	Wheat	cytosol	41.48	61.29
TraesCS7D01G474300.1	Wheat	cytosol	37.12	61.15
TraesCS6D01G125600.1	Wheat	cytosol	87.34	60.61
TraesCS2D01G458600.1	Wheat	cytosol	37.55	60.56
TraesCS2D01G458700.1	Wheat	cytosol	37.12	59.86
TraesCS1D01G228700.1	Wheat	cytosol	36.24	59.71
TraesCS4D01G218400.1	Wheat	cytosol	37.99	57.62
TraesCS2D01G580700.1	Wheat	cytosol	34.93	57.55
TraesCS1D01G174700.1	Wheat	cytosol	40.61	57.41
Os04t0628100-01	Rice	plasma membrane	96.51	56.38
TraesCS2D01G459200.1	Wheat	cytosol	33.19	55.07
TraesCS2D01G459100.1	Wheat	cytosol	33.19	55.07
TraesCS4D01G234300.1	Wheat	cytosol	37.99	55.06
TraesCS2D01G459000.1	Wheat	cytosol	32.75	54.35
KRH02499	Soybean	cytosol	86.9	52.23
TraesCS5D01G194700.1	Wheat	cytosol	32.31	51.75
PGSC0003DMT400037401	Potato	cytosol	86.46	51.7
TraesCS6B01G293300.1	Wheat	plastid	65.94	49.51
TraesCS3D01G510800.1	Wheat	cytosol	48.03	49.11
TraesCS3D01G510600.1	Wheat	cytosol	47.6	48.66
KXG29531	Sorghum	cytosol	96.07	48.14
TraesCS1D01G427100.1	Wheat	cytosol	47.6	48.02
TraesCS3D01G510400.1	Wheat	mitochondrion	45.85	46.88
HORVU7Hr1G103330.1	Barley	cytosol	80.35	46.82
TraesCS2D01G092300.1	Wheat	cytosol	28.38	44.52
TraesCS5D01G391800.1	Wheat	mitochondrion	55.02	43.45
TraesCS2D01G092200.1	Wheat	cytosol	28.38	42.21
TraesCS5D01G087500.1	Wheat	cytosol	41.92	41.92
TraesCS3D01G511200.1	Wheat	cytosol	40.61	41.89
Solyc11g005670.1.1	Tomato	cytosol, nucleus	95.63	41.01
TraesCS3D01G039700.1	Wheat	cytosol	37.12	37.61
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	59.39	37.06
TraesCS7D01G100100.1	Wheat	cytosol	38.43	36.67
TraesCS3D01G510200.1	Wheat	cytosol	35.37	36.0
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	46.29	35.81
TraesCS3D01G511000.1	Wheat	cytosol	44.1	34.12
TraesCS3D01G510900.1	Wheat	nucleus	44.1	33.89
TraesCS3D01G510300.2	Wheat	nucleus	43.23	33.33
TraesCS3D01G511900.1	Wheat	mitochondrion	47.6	33.03
TraesCS3D01G511500.1	Wheat	nucleus	41.92	32.11
TraesCS3D01G510500.1	Wheat	mitochondrion	12.66	25.44
TraesCS1D01G314000.1	Wheat	cytosol	52.4	20.34

Protein Annotations

EnsemblPlants:TraesCS7D01G443100.1	EnsemblPlantsGene:TraesCS7D01G443100	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	PANTHER:PTHR10666
PANTHER:PTHR10666:SF242	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ScanProsite:PS00299	SMART:SM00213
SUPFAM:SSF54236	TIGR:cd01803	MapMan:19.2.2.1.1	:	:	:

Description

No Description!

Coordinates

chr7D:+:562401777..562425958

Molecular Weight (calculated)

25669.0 Da

IEP (calculated)

6.822

GRAVY (calculated)

-0.458

Length

229 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDE QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGQ

Best Arabidopsis Sequence Match ( AT4G02890.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.