CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01965	Sorghum	cytosol	64.99	97.38
TraesCS6B01G293300.1	Wheat	plastid	64.55	96.72
TraesCS7D01G443100.1	Wheat	cytosol	48.14	96.07
EER89210	Sorghum	cytosol	16.41	94.94
Os04t0628100-01	Rice	plasma membrane	81.18	94.64
TraesCS2A01G408500.1	Wheat	cytosol	47.05	93.89
TraesCS6D01G248600.1	Wheat	cytosol	31.51	93.51
TraesCS7B01G366700.1	Wheat	cytosol	31.29	93.46
EES11473	Sorghum	cytosol	31.29	93.46
TraesCS7B01G366600.1	Wheat	cytosol	31.51	92.31
CDY39163	Canola	cytosol	20.13	91.09
KXG20618	Sorghum	cytosol, plastid	51.64	86.45
TraesCS6D01G125600.1	Wheat	cytosol	60.18	83.33
EER88734	Sorghum	cytosol	25.6	76.47
EER96746	Sorghum	cytosol	25.6	76.47
Solyc11g005670.1.1	Tomato	cytosol, nucleus	83.15	71.16
HORVU7Hr1G103170.9	Barley	cytosol, plasma membrane	82.28	70.54
EER92591	Sorghum	cytosol	18.82	66.67
EER96363	Sorghum	cytosol	18.82	66.67
TraesCS7B01G354000.2	Wheat	cytosol	44.64	66.02
EER97248	Sorghum	cytosol	17.94	60.29
EER97249	Sorghum	cytosol	18.6	60.28
EER99330	Sorghum	cytosol	18.82	60.14
EER90271	Sorghum	cytosol	49.89	59.84
KXG29530	Sorghum	cytosol	49.89	59.84
KXG29523	Sorghum	cytosol	49.89	59.84
KXG20644	Sorghum	cytosol	49.89	59.84
EES17768	Sorghum	cytosol	20.13	59.35
KXG35893	Sorghum	cytosol	18.38	59.15
EES02888	Sorghum	cytosol	19.91	58.71
OQU89356	Sorghum	cytosol	17.72	58.27
KXG38689	Sorghum	cytosol	16.85	56.2
KXG28223	Sorghum	mitochondrion	25.16	53.49
KRH02499	Soybean	cytosol	42.01	50.39
OQU76939	Sorghum	cytosol, plastid	50.11	50.33
PGSC0003DMT400037401	Potato	cytosol	41.79	49.87
OQU83265	Sorghum	cytosol	24.07	49.77
EES05681	Sorghum	cytosol	49.89	49.67
KXG39742	Sorghum	cytosol	15.1	48.25
OQU90737	Sorghum	cytosol	17.94	46.86
OQU89357	Sorghum	cytosol, extracellular	11.6	42.06
KXG38267	Sorghum	cytosol	14.44	41.25

Protein Annotations

MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EntrezGene:8063786	EntrezGene:8079792	UniProt:A0A194YMW6	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000626	EnsemblPlants:KXG29531	ProteinID:KXG29531	ProteinID:KXG29531.1
PFAM:PF00240	PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR45095	PANTHER:PTHR45095:SF2
SMART:SM00213	EnsemblPlantsGene:SORBI_3004G050100	SUPFAM:SSF54236	unigene:Sbi.17798	unigene:Sbi.20114	unigene:Sbi.20992
UniParc:UPI00000AC795	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	:

Description

hypothetical protein

Coordinates

chr4:-:4042868..4045944

Molecular Weight (calculated)

51189.9 Da

IEP (calculated)

7.882

GRAVY (calculated)

-0.451

Length

457 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG MQIFVKTLTG KTITLEVESS
401: DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGQ

Best Arabidopsis Sequence Match ( AT4G05320.2 )
(BLAST)

Arabidopsis Description

UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.