CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90271	Sorghum	cytosol	100.0	100.0
KXG29523	Sorghum	cytosol	100.0	100.0
KXG20644	Sorghum	cytosol	100.0	100.0
EES11473	Sorghum	cytosol	39.37	98.04
EER89210	Sorghum	cytosol	19.68	94.94
Solyc10g006480.1.1	Tomato	cytosol, extracellular, nucleus, unclear	99.74	83.15
KXG20618	Sorghum	cytosol, plastid	59.58	83.15
EES05681	Sorghum	cytosol	99.74	82.79
EER88734	Sorghum	cytosol	32.55	81.05
EER96746	Sorghum	cytosol	32.55	81.05
EES01965	Sorghum	cytosol	59.84	74.75
EER92591	Sorghum	cytosol	23.62	69.77
EER96363	Sorghum	cytosol	23.62	69.77
OQU76939	Sorghum	cytosol, plastid	79.79	66.81
EER99330	Sorghum	cytosol	23.62	62.94
EER97248	Sorghum	cytosol	22.31	62.5
EER97249	Sorghum	cytosol	23.1	62.41
KXG35893	Sorghum	cytosol	23.1	61.97
EES17768	Sorghum	cytosol	24.93	61.29
OQU89356	Sorghum	cytosol	22.31	61.15
EES02888	Sorghum	cytosol	24.67	60.65
KXG38689	Sorghum	cytosol	21.52	59.85
KXG39742	Sorghum	cytosol	19.16	51.05
KXG29531	Sorghum	cytosol	59.84	49.89
OQU90737	Sorghum	cytosol	22.83	49.71
OQU89357	Sorghum	cytosol, extracellular	14.7	44.44
KXG38267	Sorghum	cytosol	18.11	43.12
KXG28223	Sorghum	mitochondrion	22.31	39.53
OQU83265	Sorghum	cytosol	19.95	34.39

Protein Annotations

MapMan:19.2.2.1.1	Gene3D:3.10.20.90	EntrezGene:8063786	EntrezGene:8079792	UniProt:C5Z8D4	ProteinID:EER90271.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000626	ProteinID:KXG20644.1	ProteinID:KXG29523.1
ProteinID:KXG29525.1	ProteinID:KXG29528.1	EnsemblPlants:KXG29530	ProteinID:KXG29530	ProteinID:KXG29530.1	PFAM:PF00240
PRINTS:PR00348	ScanProsite:PS00299	PFscan:PS50053	PANTHER:PTHR45095	PANTHER:PTHR45095:SF2	SMART:SM00213
EnsemblPlantsGene:SORBI_3004G050000	SUPFAM:SSF54236	unigene:Sbi.17798	unigene:Sbi.20114	unigene:Sbi.20992	UniParc:UPI00000A4911
InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	RefSeq:XP_002438904.1	:

Description

hypothetical protein

Coordinates

chr4:-:4036387..4037532

Molecular Weight (calculated)

42682.6 Da

IEP (calculated)

7.853

GRAVY (calculated)

-0.453

Length

381 amino acids

Sequence
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG Q

Best Arabidopsis Sequence Match ( AT5G20620.1 )
(BLAST)

Arabidopsis Description

UBQ4Polyubiquitin 4 [Source:UniProtKB/Swiss-Prot;Acc:P0CH32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.