CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89210	Sorghum	cytosol	31.39	54.43
EER88734	Sorghum	cytosol	50.37	45.1
EER96746	Sorghum	cytosol	50.37	45.1
TraesCSU01G094900.1	Wheat	cytosol	48.91	44.97
TraesCS7A01G105400.1	Wheat	cytosol	43.8	41.38
TraesCS7A01G105500.1	Wheat	cytosol	40.15	40.15
TraesCSU01G095200.1	Wheat	cytosol	37.96	36.36
EER92591	Sorghum	cytosol	32.85	34.88
EER96363	Sorghum	cytosol	32.85	34.88
EER97248	Sorghum	cytosol	34.31	34.56
OQU89356	Sorghum	cytosol	34.31	33.81
OQU90737	Sorghum	cytosol	43.07	33.71
EES02888	Sorghum	cytosol	37.23	32.9
EES17768	Sorghum	cytosol	37.23	32.9
EER97249	Sorghum	cytosol	33.58	32.62
KXG35893	Sorghum	cytosol	33.58	32.39
EER99330	Sorghum	cytosol	33.58	32.17
KXG20618	Sorghum	cytosol, plastid	59.85	30.04
KXG38267	Sorghum	cytosol	32.85	28.12
EES01965	Sorghum	cytosol	59.85	26.89
KXG39742	Sorghum	cytosol	27.74	26.57
EES11473	Sorghum	cytosol	28.47	25.49
KXG28223	Sorghum	mitochondrion	39.42	25.12
OQU83265	Sorghum	cytosol	40.15	24.89
TraesCS7B01G004300.1	Wheat	cytosol	36.5	22.94
TraesCSU01G095100.1	Wheat	cytosol	40.15	22.82
TraesCS7D01G100100.1	Wheat	cytosol	39.42	22.5
KXG29530	Sorghum	cytosol	59.85	21.52
KXG29523	Sorghum	cytosol	59.85	21.52
KXG20644	Sorghum	cytosol	59.85	21.52
EER90271	Sorghum	cytosol	59.85	21.52
OQU89357	Sorghum	cytosol, extracellular	18.98	20.63
OQU76939	Sorghum	cytosol, plastid	59.85	18.02
EES05681	Sorghum	cytosol	59.85	17.86
KXG29531	Sorghum	cytosol	56.2	16.85

Protein Annotations

EnsemblPlants:KXG38689	EnsemblPlantsGene:SORBI_3001G267300	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	PANTHER:PTHR10666	PANTHER:PTHR10666:SF238
PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ProteinID:KXG38689	ProteinID:KXG38689.1	SMART:SM00213
SUPFAM:SSF54236	UniParc:UPI00081ABDF7	UniProt:A0A1B6QL86	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr1:+:51006785..51007397

Molecular Weight (calculated)

15329.2 Da

IEP (calculated)

4.718

GRAVY (calculated)

-0.355

Length

137 amino acids

Sequence
(BLAST)

001: MQIFVKMLNG KTITLEVDPS DTVGDVKAKI LDQQWAKIQD QQRLLFNGQQ LVDEQTLADY DVHRLSTLHL DCPMQVFVKR STGQTITLEV EPSNTIDDVK
101: GKISGHQSLT FYGNELDDGK TLAECNVHMG STLHLDA

Best Arabidopsis Sequence Match ( AT4G05050.4 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGF

Arabidopsis Description

UBQ11Polyubiquitin [Source:UniProtKB/TrEMBL;Acc:Q8H0Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.