Factsheet for TraesCS6D01G125600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	23.03	98.7
CDY39163	Canola	cytosol	27.88	91.09
TraesCS7D01G442700.1	Wheat	cytosol, nucleus	83.94	90.82
TraesCS6D01G109600.1	Wheat	cytosol	60.91	87.77
TraesCS7D01G443100.1	Wheat	cytosol	60.61	87.34
TraesCS2D01G405500.1	Wheat	cytosol	59.7	86.4
TraesCS2A01G408500.1	Wheat	cytosol	59.39	85.59
TraesCS7D01G466600.1	Wheat	cytosol	37.88	81.7
TraesCS6D01G248600.1	Wheat	cytosol	37.88	81.17
TraesCS7B01G366700.1	Wheat	cytosol	37.58	81.05
TraesCS7D01G442900.1	Wheat	cytosol	37.27	80.39
TraesCS7D01G453100.1	Wheat	cytosol	35.45	75.48
TraesCS7D01G494400.1	Wheat	cytosol	33.33	71.9
TraesCS5D01G231400.1	Wheat	cytosol	33.33	71.9
Os04t0628100-01	Rice	plasma membrane	83.64	70.41
TraesCS7B01G354000.2	Wheat	cytosol	65.45	69.9
TraesCS4D01G218300.1	Wheat	cytosol	25.76	69.11
TraesCS7D01G143000.1	Wheat	cytosol	32.42	69.03
TraesCS6D01G136800.1	Wheat	cytosol	30.3	68.97
HORVU7Hr1G103330.1	Barley	cytosol	82.12	68.96
TraesCS1D01G206100.1	Wheat	cytosol	32.12	68.39
TraesCS4D01G006900.1	Wheat	cytosol	26.36	67.44
TraesCS1D01G206400.1	Wheat	cytosol	31.21	66.45
TraesCS5D01G269800.1	Wheat	cytosol	26.06	63.7
TraesCS3D01G510500.1	Wheat	mitochondrion	21.52	62.28
TraesCS6D01G137400.1	Wheat	cytosol	25.45	62.22
TraesCS7D01G474200.1	Wheat	cytosol	26.06	61.87
TraesCS1D01G109800.1	Wheat	cytosol	28.79	61.29
TraesCS1D01G405400.1	Wheat	cytosol	28.79	61.29
TraesCS7D01G474300.1	Wheat	cytosol	25.76	61.15
TraesCS5D01G087500.1	Wheat	cytosol	42.42	61.14
TraesCS2D01G458600.1	Wheat	cytosol	26.06	60.56
KXG29531	Sorghum	cytosol	83.33	60.18
TraesCS2D01G458700.1	Wheat	cytosol	25.76	59.86
KRH02499	Soybean	cytosol	69.09	59.84
TraesCS1D01G228700.1	Wheat	cytosol	25.15	59.71
TraesCS3D01G510800.1	Wheat	cytosol	40.3	59.38
PGSC0003DMT400037401	Potato	cytosol	68.79	59.27
TraesCS4D01G218400.1	Wheat	cytosol	26.36	57.62
TraesCS3D01G510600.1	Wheat	cytosol	39.09	57.59
TraesCS2D01G580700.1	Wheat	cytosol	24.24	57.55
TraesCS1D01G174700.1	Wheat	cytosol	28.18	57.41
TraesCS3D01G510400.1	Wheat	mitochondrion	38.48	56.7
TraesCS2D01G459100.1	Wheat	cytosol	23.03	55.07
TraesCS2D01G459200.1	Wheat	cytosol	23.03	55.07
TraesCS4D01G234300.1	Wheat	cytosol	26.36	55.06
TraesCS2D01G459000.1	Wheat	cytosol	22.73	54.35
TraesCS5D01G194700.1	Wheat	cytosol	22.42	51.75
Solyc11g005670.1.1	Tomato	cytosol, nucleus	83.03	51.31
TraesCS3D01G511200.1	Wheat	cytosol	33.33	49.55
TraesCS2D01G474700.1	Wheat	cytosol	11.52	49.35
TraesCS3D01G510200.1	Wheat	cytosol	31.52	46.22
TraesCS3D01G039700.1	Wheat	cytosol	31.52	46.02
TraesCS2D01G092300.1	Wheat	cytosol	19.7	44.52
TraesCS2D01G092200.1	Wheat	cytosol	20.3	43.51
TraesCS1D01G427100.1	Wheat	cytosol	29.39	42.73
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	37.58	41.89
TraesCS3D01G511000.1	Wheat	cytosol	37.27	41.55
TraesCS3D01G511900.1	Wheat	mitochondrion	40.3	40.3
TraesCS3D01G510300.2	Wheat	nucleus	35.45	39.39
TraesCS3D01G510900.1	Wheat	nucleus	35.45	39.26
TraesCS3D01G511500.1	Wheat	nucleus	35.45	39.13
TraesCS5D01G391800.1	Wheat	mitochondrion	33.33	37.93
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	36.67	32.97
TraesCS7D01G100100.1	Wheat	cytosol	22.12	30.42
TraesCS1D01G314000.1	Wheat	cytosol	40.61	22.71

Protein Annotations

EnsemblPlants:TraesCS6D01G125600.1	EnsemblPlantsGene:TraesCS6D01G125600	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	PANTHER:PTHR10666
PANTHER:PTHR10666:SF242	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ScanProsite:PS00299	SEG:seg
SMART:SM00213	SUPFAM:SSF54236	TIGR:cd01803	MapMan:19.2.2.1.1	:	:

Description

No Description!

Coordinates

chr6D:-:89329061..89365469

Molecular Weight (calculated)

36791.4 Da

IEP (calculated)

9.270

GRAVY (calculated)

-0.426

Length

330 amino acids

Sequence
(BLAST)

001: MAAPSRTITS RRSPPSTWCS ASAVMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG
101: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGLMQI FVKTLTGKTI TLEVESSDTI
201: DNVKAKIQDK EGIPPDQQRL IFAGKQLEDG RTLADYNIQK ESTLHLVLRL RGGMQIFVKT LTGKTITLEV ESSDTIDNVK AKIQDKEGIP PDQQRLIFAG
301: KQLEDGRTLA DYNIQKESTL HLVLRLRGGQ

Best Arabidopsis Sequence Match ( AT5G20620.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG SF

Arabidopsis Description

UBQ4Polyubiquitin 4 [Source:UniProtKB/Swiss-Prot;Acc:P0CH32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.