Factsheet for TraesCS3D01G511500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G510500.1	Wheat	mitochondrion	34.78	91.23
TraesCS3B01G568000.1	Wheat	cytosol	84.28	84.56
TraesCS3D01G510400.1	Wheat	mitochondrion	60.54	80.8
TraesCS3D01G510600.1	Wheat	cytosol	59.87	79.91
TraesCS3D01G510800.1	Wheat	cytosol	59.2	79.02
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	69.9	70.61
TraesCS3D01G511000.1	Wheat	cytosol	68.9	69.59
TraesCS3D01G510900.1	Wheat	nucleus	69.23	69.46
TraesCS3D01G510300.2	Wheat	nucleus	68.9	69.36
HORVU3Hr1G111000.1	Barley	cytosol	35.12	68.63
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	16.39	63.64
TraesCS6D01G248600.1	Wheat	cytosol	32.11	62.34
TraesCS3D01G511900.1	Wheat	mitochondrion	68.56	62.12
TraesCS7D01G442900.1	Wheat	cytosol	31.77	62.09
OQU83265	Sorghum	cytosol	43.48	58.82
TraesCS7D01G453100.1	Wheat	cytosol	30.43	58.71
TraesCS3D01G511200.1	Wheat	cytosol	43.48	58.56
TraesCS3D01G510200.1	Wheat	cytosol	43.48	57.78
TraesCS7D01G494400.1	Wheat	cytosol	27.09	52.94
TraesCS5D01G231400.1	Wheat	cytosol	27.09	52.94
TraesCS2D01G474700.1	Wheat	cytosol	13.38	51.95
TraesCS6D01G136800.1	Wheat	cytosol	25.08	51.72
TraesCS7D01G143000.1	Wheat	cytosol	25.75	49.68
TraesCS1D01G206100.1	Wheat	cytosol	25.75	49.68
TraesCS1D01G206400.1	Wheat	cytosol	25.42	49.03
TraesCS3D01G039700.1	Wheat	cytosol	34.45	45.58
TraesCS7D01G442700.1	Wheat	cytosol, nucleus	45.15	44.26
TraesCS4D01G218300.1	Wheat	cytosol	17.73	43.09
TraesCS4D01G006900.1	Wheat	cytosol	18.39	42.64
TraesCS2D01G405500.1	Wheat	cytosol	32.44	42.54
TraesCS6D01G109600.1	Wheat	cytosol	32.44	42.36
TraesCS5D01G269800.1	Wheat	cytosol	19.06	42.22
TraesCS7D01G443100.1	Wheat	cytosol	32.11	41.92
TraesCS6D01G137400.1	Wheat	cytosol	18.39	40.74
TraesCS7D01G474300.1	Wheat	cytosol	18.73	40.29
TraesCS7D01G474200.1	Wheat	cytosol	18.73	40.29
TraesCS5D01G087500.1	Wheat	cytosol	30.77	40.17
TraesCS2D01G458600.1	Wheat	cytosol	19.06	40.14
TraesCS2D01G458700.1	Wheat	cytosol	19.06	40.14
TraesCS1D01G228700.1	Wheat	cytosol	18.06	38.85
TraesCS1D01G109800.1	Wheat	cytosol	19.73	38.06
TraesCS1D01G405400.1	Wheat	cytosol	19.73	38.06
TraesCS1D01G174700.1	Wheat	cytosol	19.4	35.8
TraesCS4D01G218400.1	Wheat	cytosol	18.06	35.76
TraesCS6D01G125600.1	Wheat	cytosol	39.13	35.45
TraesCS4D01G234300.1	Wheat	cytosol	18.39	34.81
TraesCS2D01G459200.1	Wheat	cytosol	15.72	34.06
TraesCS2D01G459100.1	Wheat	cytosol	15.72	34.06
TraesCS2D01G580700.1	Wheat	cytosol	15.38	33.09
TraesCS5D01G194700.1	Wheat	cytosol	15.72	32.87
TraesCS2D01G459000.1	Wheat	cytosol	15.05	32.61
TraesCS7D01G466600.1	Wheat	cytosol	16.05	31.37
TraesCS1D01G427100.1	Wheat	cytosol	22.41	29.52
CDX79728	Canola	cytosol	21.07	27.75
TraesCS2D01G092300.1	Wheat	cytosol	13.38	27.4
TraesCS2D01G092200.1	Wheat	cytosol	13.71	26.62
TraesCS7D01G100100.1	Wheat	cytosol	20.4	25.42
TraesCS5D01G391800.1	Wheat	mitochondrion	19.73	20.34
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	24.41	19.89
TraesCS1D01G314000.1	Wheat	cytosol	29.43	14.92

Protein Annotations

EnsemblPlants:TraesCS3D01G511500.1	EnsemblPlantsGene:TraesCS3D01G511500	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	PFAM:PF00240
PFscan:PS50053	PRINTS:PR00348	ScanProsite:PS00299	SEG:seg	SMART:SM00213	SUPFAM:SSF54236
TIGR:cd01769	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:596096305..596113079

Molecular Weight (calculated)

33522.5 Da

IEP (calculated)

5.782

GRAVY (calculated)

-0.634

Length

299 amino acids

Sequence
(BLAST)

001: MSPKKRLHLS SAGPNPEDHV EEATPGVSTS GTEDSEEEEE EVSDSSRSSS SEDSKDYGGS HSLQIDGADI DDSSGMHIFV KTPTGMTIRL KVHSSDTLYT
101: VKAKIQQQYC LVFDGVWLED NRTLAHYGIQ HDSTIDLQEK MQIYVTETRG GRTIALEVDS LDTIGNVKSK IQEMEGFPKG QQCIIFANKQ LENDNRTLAD
201: HNIWKESTLL LVLRPCRPEK SRIMQTFVKN LEGKTLTLEV GQSDTINSVK VKIYEKDAIP PRKQRIIFNG NQLEDHHTMA DYKIGRKSTL HLALRLCGC

Best Arabidopsis Sequence Match ( AT4G02890.3 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGF

Arabidopsis Description

UBQ14Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.