Factsheet for TraesCS1D01G314000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G313500.3	Wheat	cytosol, plastid	95.42	94.94
TraesCS1B01G325300.1	Wheat	cytosol	63.73	94.71
TraesCSU01G124300.1	Wheat	cytosol	35.42	69.67
TraesCS2D01G474700.1	Wheat	cytosol	8.98	68.83
TraesCS6D01G248600.1	Wheat	cytosol	16.61	63.64
TraesCS7D01G442900.1	Wheat	cytosol	16.27	62.75
TraesCS7D01G453100.1	Wheat	cytosol	16.1	61.29
TraesCS7D01G454100.1	Wheat	cytosol, golgi, unclear	7.8	59.74
TraesCS5D01G231400.1	Wheat	cytosol	14.07	54.25
TraesCS7D01G494400.1	Wheat	cytosol	14.07	54.25
TraesCS1D01G427100.1	Wheat	cytosol	20.34	52.86
TraesCS6D01G109600.1	Wheat	cytosol	20.51	52.84
TraesCS6D01G136800.1	Wheat	cytosol	12.88	52.41
TraesCS7D01G443100.1	Wheat	cytosol	20.34	52.4
TraesCS2D01G405500.1	Wheat	cytosol	20.0	51.75
TraesCS7D01G143000.1	Wheat	cytosol	13.56	51.61
TraesCS1D01G206100.1	Wheat	cytosol	13.39	50.97
TraesCS1D01G206400.1	Wheat	cytosol	13.22	50.32
TraesCS7D01G466600.1	Wheat	cytosol	12.71	49.02
TraesCS4D01G218300.1	Wheat	cytosol	9.49	45.53
TraesCS4D01G006900.1	Wheat	cytosol	9.49	43.41
TraesCS7D01G442700.1	Wheat	cytosol, nucleus	22.37	43.28
TraesCS6D01G137400.1	Wheat	cytosol	9.32	40.74
TraesCS5D01G269800.1	Wheat	cytosol	9.32	40.74
TraesCS3D01G510400.1	Wheat	mitochondrion	15.42	40.62
TraesCS6D01G125600.1	Wheat	cytosol	22.71	40.61
TraesCS3D01G510800.1	Wheat	cytosol	15.08	39.73
TraesCS2D01G458700.1	Wheat	cytosol	9.49	39.44
TraesCS2D01G458600.1	Wheat	cytosol	9.49	39.44
TraesCS5D01G087500.1	Wheat	cytosol	15.08	38.86
TraesCS7D01G474200.1	Wheat	cytosol	9.15	38.85
TraesCS7D01G474300.1	Wheat	cytosol	9.15	38.85
TraesCS2D01G580700.1	Wheat	cytosol	9.15	38.85
TraesCS1D01G228700.1	Wheat	cytosol	9.15	38.85
TraesCS1D01G405400.1	Wheat	cytosol	10.17	38.71
TraesCS1D01G109800.1	Wheat	cytosol	10.17	38.71
TraesCS3D01G510600.1	Wheat	cytosol	14.58	38.39
TraesCS2D01G459100.1	Wheat	cytosol	8.81	37.68
TraesCS1D01G174700.1	Wheat	cytosol	10.34	37.65
TraesCS4D01G218400.1	Wheat	cytosol	9.49	37.09
TraesCS2D01G459000.1	Wheat	cytosol	8.64	36.96
TraesCS2D01G459200.1	Wheat	cytosol	8.47	36.23
CDX79728	Canola	cytosol	13.73	35.68
TraesCS5D01G194700.1	Wheat	cytosol	8.64	35.66
TraesCS4D01G234300.1	Wheat	cytosol	9.49	35.44
TraesCS3D01G511200.1	Wheat	cytosol	12.54	33.33
TraesCS3D01G510200.1	Wheat	cytosol	12.37	32.44
TraesCS3D01G510700.1	Wheat	cytosol, nucleus, plastid	16.1	32.09
TraesCS3D01G039700.1	Wheat	cytosol	12.2	31.86
TraesCS3D01G511000.1	Wheat	cytosol	15.59	31.08
TraesCS3D01G510300.2	Wheat	nucleus	15.59	30.98
TraesCS3D01G510900.1	Wheat	nucleus	14.92	29.53
TraesCS3D01G511500.1	Wheat	nucleus	14.92	29.43
TraesCS3D01G511900.1	Wheat	mitochondrion	16.44	29.39
TraesCS3D01G510500.1	Wheat	mitochondrion	5.59	28.95
TraesCS2D01G092300.1	Wheat	cytosol	6.95	28.08
TraesCS5D01G391800.1	Wheat	mitochondrion	13.73	27.93
TraesCS2D01G092200.1	Wheat	cytosol	7.29	27.92
TraesCS7D01G100100.1	Wheat	cytosol	11.19	27.5
TraesCS7D01G024600.1	Wheat	cytosol, mitochondrion	14.92	23.98

Protein Annotations

EnsemblPlants:TraesCS1D01G314000.1	EnsemblPlantsGene:TraesCS1D01G314000	Gene3D:3.10.20.90	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000626	InterPro:Ubiquitin	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_CS	InterPro:Ubiquitin_dom	ncoils:Coil
PANTHER:PTHR45095	PANTHER:PTHR45095:SF2	PFAM:PF00240	PFscan:PS50053	PRINTS:PR00348	ScanProsite:PS00299
SEG:seg	SMART:SM00213	SUPFAM:SSF54236	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1D:-:409067294..409070779

Molecular Weight (calculated)

65956.5 Da

IEP (calculated)

6.253

GRAVY (calculated)

-0.304

Length

590 amino acids

Sequence
(BLAST)

001: MTSLLVSERN PNPLLTRTTP LDSPLHELPV DPSLVHTHLS ALLSRVTATT RKRGEKKKSS VVSMSGAGSG AAPLEFPSAE WRRVYDRLMG LLPRVEELAA
101: DRARLEEINR LSEAREKSLR ARLLQAEASR ERWKTAYTEL PPGANPKLAE LQKRDLVDSE ACEALSDPDI SQLKQVTNED TNEMDLEQCT MQIFVKINCS
201: NFRKKRKIHC LKTITLEVMG SDTIYDVKDK IRDKEGIPEG QQRLMFGSEL LMDSGTLEYY NIEEESTLTL DLVPRGMHIF VKTLANKIMT IEVGGEDSIY
301: IVKAKVFDET GICPGRQRLI FAGNELEDGC TLADYNVQNE STLHIVFCLA CQRDGMHIFV KTLTGKIMAI DVEGEDSLYS VKAKIFDETG IPPGRQRLIF
401: AGKQLEDGRT LADYNVHNEC TIHLVVFHGL TCQRSGMHMH IIIRGLTDKI MTAVAEGEDT IYSLKVKVSA ETGVPPDRQT LIFAGNVLED GRTLADYDVQ
501: HASTLHVVLR GVTRQRGGMR IFVRTVNGKE VIDRAFKPRQ TIDDIKAWIY SELCILPDHQ QLSDQGGAPL AEEISRSCTL VLQIRPPGGQ

Best Arabidopsis Sequence Match ( AT4G05320.1 )
(BLAST)

001: MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID
101: NVKAKIQDKE GIPPDQQRLI FAGKQLEDGR TLADYNIQKE STLHLVLRLR GGMQIFVKTL TGKTITLEVE SSDTIDNVKA KIQDKEGIPP DQQRLIFAGK
201: QLEDGRTLAD YNIQKESTLH LVLRLRGGMQ IFVKTLTGKT ITLEVESSDT IDNVKAKIQD KEGIPPDQQR LIFAGKQLED GRTLADYNIQ KESTLHLVLR
301: LRGGMQIFVK TLTGKTITLE VESSDTIDNV KAKIQDKEGI PPDQQRLIFA GKQLEDGRTL ADYNIQKEST LHLVLRLRGG F

Arabidopsis Description

UBQ10Polyubiquitin 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8H159]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.